Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3347 ATGTCTTCTACTTCATCTATCAGAAATCTTCTTCCTAGATCATTCTCTTCCAAGAGAAAATCAACTTCAAACCCTAAATTCCCAAATCCAGATACAGAAAATACTCCTCCCACAGATCCCAACATCATTCAGATCAACCCTCAAAAGTCATTGTCAATCACAACCAAACAATCACAGTCCAAACCCCCAATTTCAATTACCCCTCTTGACTCAGACCCATCAGTGAAAGTTGTGGTACGAATTAGACCTACTGTCAACATTGGAATAGGAGATGAAACTGTTAAGAAGGTTTCTTCTGATACATTGTGTGTTGGGGGTAGGCAATTTCAATTTGATTCAATTTTTGATACCAACACAAGTCAGGAAGATATTTTTCAGTCAGTTGGTGTTCCTTTGGTTAGAAATGCTTTAGCTGGTTACAACACTTCAATTCTATCATATGGCCAGTCTGGAAGTGGAAAGACATATACAATGTGGGGTCCCCCAAGTGCCATGTTTGAGGAGCCCTCACCTCAAAGTCACAAAGGAATTGTACCTCGGATCTTCCAAATGTTGTTTTCTGAGCTTGAAAAAGAGCAGGGTATGTCTGAAGGGAAACAGTTCAATTATCAGTGTCGGTGTTGTTTTCTTGAGATATACAACGGACAAATTGGGGATTTACTTGATCCAACCCAGCGGAACCTTGAGATGAAGGTTGACTCAAAAAATGCATTGTCCTTAGAGAATCTGAGTGAGGAATATGTCACTAGCTATGATGAAGTCACACAAATTCTGATTAAGGGTCTCTCTAGCAGAAAAGTTGGAGCAACAACCTTAAATTCTAAGAGCTCTAGATCGCATATTATTTTCACTTTTGTGATTGAGTCTTGGTGTAAGGGAACCTCAACAAATGGTTTCAGTAGTTCAAAAAGTAGCCGAATTAGCCTTATTGATGTTGCTGGGCAAGACAGGAACAAAGTTGATGGCGCAGGCAGACATTGTCTAAGGGAAACAAGAAATATAAAGAAATCCTTATCACAGCTTGGGCACTTAGTAGATGCTTTGACTAAAGAACCTCGCTTGGGAAAAGCAGAAGTTCCAAACAGAAGCTCTTGTTTAACCCGTTTACTACATGAATCACTCGGTGGAAATGCCAAACTCTCAGTAATCTGTTCCATCTACCCAGATAACAGGAATAATAGTGAAACACTGCGCACACTCAGATTTGGACAGCGAGTAAGATTAATTCAAAATGAGCCTGTTATCAATGAAATAAAGGAGGATGATGTTAATGATTTGAGTGATCAAATCCGACAGCTGAAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCGAAGCTCAGATGGGAGTAGAAATGGATACTTCCATGTACAGAATGTACGCGAAAGCCTCAATAATTTGAGGGTCAGCTTAAACCGCTCTCTACTCATACCTAACATTGATGATAATGATACTGATGAAGAGGTGAATGTGAATGAGGAGGACGTAAAGGAATTACGCCAGCAAATTGATGAGTTTTATAGTTCATGCGAAGGAAATCCTATTGATATATCTGTCAGTGAAGATTGTGTCCAGTATTATTCTGTTGAGGAAGGTGATGAAAGTGAAAAAGAGGAAGTATGTTTGGGAGAAGAATTTATCAAGCTTTGTCATGAGGACAGTGATGATAACACCTTGTATGCATCAGTCAACAACACCTCAAGGGCCATTAGATCTTCATTTAGAGATAGCATTTCAGTCAGCTCATCTATTCGATCTCCAATGCTTCTTGAGGAACCACAACTTTCTGAGTCTCCAAAAATCAGGAATTTACAGAGGAAGAGTGTGGCCTTTTCATCTAGTTGTCTTGGAAGTTCAAACAAACTGGCGGAGGATAATTCAAGTTCCAATAAGGATTTGTTGGGGAAGTCATTTACAAAGGATGAACTTATGAGATCCTCACTAAGATCAAGCAATGTTTTTCCAGGTCCGACTGAGTCCTTGGCAGCAAGCCTTAAGAGGGGATTACAGATAATTGATTCTCATCAGCGGAACTCATTATTGAACAAATCCTCAACTTCATTCTCTTTTGGGCGCTTAAGCTGTGGTGATTCTTCTGATCAAACAATCCAACAGAAGAAATATTCCATTGATGAAAGAACTGCTACATTGCTTTGTGGTTATTGCCGCAAAATAATATGTGATCAGGATTCCAATGAGGTTCCAGGTAGCATTGACACAGCCGAATCAGGAAATCCGGATGGACTGACAGATAAGGCTCCAAAGGGTTTGGAGAGTATTATGGAAAAAGAAATCACGAGAGAAAAGGAGCTTGAGAATGTTTGCAAGGAGCAAGCAGTTAGAATCGATGAACTAAATCAATTGGTGGAGAAACTTAAAGGAGAAAAAGAACTAAACTCCATTGTTGTGTATGGTAAAGAAAGCAGCAAGCAGGCTGAAGATGCAGAAGAATACAAGCTTCCGAGGGGCACTTCCTCAGACTGTGATTTAGAAGAAAAATATGAAATCAAAGAAGTCCGGGAAGAACTAACTCAAAGAAGCATCTCTTTCGATGCTACCGAGAAGGAAGAACTACTCAAGGAAATTCAGAATCTGAGAAGCAAGCTGCAATTATACAGTGATGCACCAGTTAAAATGTCCACTGACAAACTGAGATCTTCGTTAATGTCAAGATCCATTCAATTGAGAAAAAGTGGTGTATTTTCTCCTAATAATAATGGTGGGGAAGAGCTAGAGAAAGAAAGAGAGAGATGGACAGAAATGGAAAGCGAGTGGATTTGTCTTACTGATGAACTAAGAGTTGATCTTGAGGCCAACCGGCAGAGGGCAGAGAGGGTTGAGCAGGAATTGAGGTTAGAGAAGATGTGCACCGAGGAGTTAGATGATGCACTGAAAAGATCAGTTCTTGGACATGCTAGAATGGTAGAACACTATGTTGACCTCCAAGAAAAGTATAACGATTTGGTTGCAAAACACAATGCTATAATGCATGGCATAGCCGAGGTGAAGAAGGCGGCAGCAAAGGCTGGAAAAAGGGGTCATGCTCGCTTTGCCAAATCGCTCGCTGCTGAGCTTTCTGCATTAAGGGTGGAGAGGGAAAGAGAAGCAAAATTCTTGAAAAAGGAGAACACAAGTCTCAAGATTCAACTTAGGGACACTGCAGAAGCTGTTCATGCAGCTGGAGAACTACTTGTCAGACTCAGAGAAGCTGAACATGCAGCTTCTGTTGCAGAGGATAATTTTACAAAAGTGCAACAAGATAACGAAAAGCTAAAAAAGCAAATGGATAAACTCAAAAGAAAGCACAAGATGGAGCTGATTACCATGAAGCAGTACCTTGCAGAGAGCAAATTACCAGAGTCTGCATTGAAACAGCTATATAGAGAGGATTCTGATGTGGCACAGAACAATACAACTCGTCACAATCAGGATGATGATCAGGCATGGAGAGCTGAATTTGGAGCAATCTATCAAGAGCATTATTAA 3486 0.4033 MSSTSSIRNLLPRSFSSKRKSTSNPKFPNPDTENTPPTDPNIIQINPQKSLSITTKQSQSKPPISITPLDSDPSVKVVVRIRPTVNIGIGDETVKKVSSDTLCVGGRQFQFDSIFDTNTSQEDIFQSVGVPLVRNALAGYNTSILSYGQSGSGKTYTMWGPPSAMFEEPSPQSHKGIVPRIFQMLFSELEKEQGMSEGKQFNYQCRCCFLEIYNGQIGDLLDPTQRNLEMKVDSKNALSLENLSEEYVTSYDEVTQILIKGLSSRKVGATTLNSKSSRSHIIFTFVIESWCKGTSTNGFSSSKSSRISLIDVAGQDRNKVDGAGRHCLRETRNIKKSLSQLGHLVDALTKEPRLGKAEVPNRSSCLTRLLHESLGGNAKLSVICSIYPDNRNNSETLRTLRFGQRVRLIQNEPVINEIKEDDVNDLSDQIRQLKEELIRAKADVRSSDGSRNGYFHVQNVRESLNNLRVSLNRSLLIPNIDDNDTDEEVNVNEEDVKELRQQIDEFYSSCEGNPIDISVSEDCVQYYSVEEGDESEKEEVCLGEEFIKLCHEDSDDNTLYASVNNTSRAIRSSFRDSISVSSSIRSPMLLEEPQLSESPKIRNLQRKSVAFSSSCLGSSNKLAEDNSSSNKDLLGKSFTKDELMRSSLRSSNVFPGPTESLAASLKRGLQIIDSHQRNSLLNKSSTSFSFGRLSCGDSSDQTIQQKKYSIDERTATLLCGYCRKIICDQDSNEVPGSIDTAESGNPDGLTDKAPKGLESIMEKEITREKELENVCKEQAVRIDELNQLVEKLKGEKELNSIVVYGKESSKQAEDAEEYKLPRGTSSDCDLEEKYEIKEVREELTQRSISFDATEKEELLKEIQNLRSKLQLYSDAPVKMSTDKLRSSLMSRSIQLRKSGVFSPNNNGGEELEKERERWTEMESEWICLTDELRVDLEANRQRAERVEQELRLEKMCTEELDDALKRSVLGHARMVEHYVDLQEKYNDLVAKHNAIMHGIAEVKKAAAKAGKRGHARFAKSLAAELSALRVEREREAKFLKKENTSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEDNFTKVQQDNEKLKKQMDKLKRKHKMELITMKQYLAESKLPESALKQLYREDSDVAQNNTTRHNQDDDQAWRAEFGAIYQEHY* 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3347 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 441 IPR027417 -
Mtr5g3347 1161 Pfam Kinesin motor domain 104 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3347 1161 SMART kinesin_4 72 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3347 1161 Coils Coil 768 795 - -
Mtr5g3347 1161 Coils Coil 929 953 - -
Mtr5g3347 1161 Coils Coil 1022 1042 - -
Mtr5g3347 1161 PRINTS Kinesin heavy chain signature 139 160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3347 1161 PRINTS Kinesin heavy chain signature 270 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3347 1161 PRINTS Kinesin heavy chain signature 306 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3347 1161 PRINTS Kinesin heavy chain signature 359 380 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3347 1161 ProSiteProfiles Kinesin motor domain profile. 74 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3347 1161 Coils Coil 416 443 - -
Mtr5g3347 1161 PANTHER KINESIN-LIKE PROTEIN KIN-12F 67 1161 - -
Mtr5g3347 1161 Coils Coil 1067 1108 - -
Mtr5g3347 1161 Coils Coil 848 875 - -
Mtr5g3347 1161 MobiDBLite consensus disorder prediction 1 44 - -
Mtr5g3347 1161 PANTHER CENTROMERE PROTEIN E 67 1161 - -
Mtr5g3347 1161 MobiDBLite consensus disorder prediction 1 29 - -
Mtr5g3347 1161 Gene3D Kinesin motor domain 70 450 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3347 Mtr-Chr5 42392095 42397806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3347 61 445 Miscellaneous Gene Families AT5G06670 32.570 2.54e-49 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3347 K10400 - gmx:100806960 1613.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3347 5 42392095 42397806 Mtr5g3347 5 42392095 42397806 ECH
Mtr3g1413 3 25419836 25426826 Mtr5g3347 5 42392095 42397806 PCT