Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3342 ATGTGTTCCCCACGCGCTCTCTCCGTTTCACTCTCTCTGTTTCTTCTTCTAGCACTTGTTTCAGCTCAAACTAAGAGATCTGTATGGAACACACTCACAGGAAGTCCACCACTGGTCATCTCACATGGTGGTTTTTCGGGCATATTTCCTGATTCTAGTGACTCTGCTTATATTTTGGCCGCAGCAACCAGCACACCCAATGCCGCTCTATGGTGTGATGTGCAATTGACGAAAGATGCAGTTGGGATTTGCCTTCCAAATCTCAATCTTTTAAACTCTACTAACATTTTCGGTGTATTCCCAAATAAAACTACGAGTTATTTGGTTAATGGTGAATCCACAGCTGGCTATTTTTCTGTGGATTACAGCTTCGAGGACCTATCCACTGTCACTGTAACTCAGGGAGTATTCAGTAGGTCACCTCTTCTCGATGGCAATAATTTTATAATTAATACCGTCGATGAAGTACTCAAATTAGTTGCCCCACAAACACCAGGTTTGTGGTTGAACATTCAGCATGATGCGTTCTACTCGCAACACAATTTGAGCATGAGAAGCTTTGTACTTGCAGTTTCTAGAAGACTGCATGTCAGTTATATTTCATCACCTGAGGCTGGTTTTCTGAGAAGTATTACAAAACGCTTCAACCCAAAAACAACGAAACTTGTCTTTAGGTTTCTCAATCAGGAAGACACTGATCCATCAACCAATCAGACTTATGGTTCATTCTTAAAAAATCTTACGTTTATCAAGACGTTTGCTTCTGGAATTCTTGTTCCCAAGGGATACATATGGCCTGTAGATGCTAGTCTTTATCTACAACCACATACCTCTTTGGTCTCAGACGCGCATAAAGCGGGGCTGGAAGTATTTGCAGCAGATTTTTCAAATGATATTGTTATTAGCTATAATTACAGTTTCGATCCTCTTGCTGAATCCCTCCAATTCATTGATAACGGCGAGTTCACCGTTGATGGTGTGCTGACTGATTTTCCTTTAACTCCATCCGCAGCAATAGATTGCTTTGCTCACATAGGCAACAATGCTACAAGAAGAGATAAAACCTTGATTATCTCAAAGTATGGAGCAAGTGGAGATTTTCCAGCTTGTACCAACTTAGCATATAACAAGGCCATACAAGATGGTGTGGATGTTCTCGACTGTCCTGTTCAATTGTCAAAGGACGGAACACCATTTTGCTTAAAATCAATTGATCTTCTAGAGAGTACCACAGTTGCTCAAACTAGCTTCAGCGATTTAGCAATGAGTGTCCCTGAGATTAAATCTGGCCGTGGCATATTTTCATTCAACTTGACGTGGTCCGATATAAAAGGACTGACCCCCTCAATATTGGCCCCTTTCTCAAAATACACATTGTTCAGGAATCCAAAAGCCAAGAACGCTGGGACATTTTTAACATTATCAGATTTCTTGTCGTTAACTAAAAATCAGACTTCTCTATCAGGCGTCTTGATCATTGTTGAGAATGCAGCCTATCTTGCAGAAAAGCAGGGATTAAGTGTGACCGATGTTGTCATTAAGGCTTTAAGTAATGCAGGTTATGATAAACCAGGGAGCCAAAAAGTTTATATCCAATCCACTAATAGCTCTGTACTACTGAAGTTCAAGGAGAAAACCAAATACGAGCTTGTCTACCAGATTGACGAGAGTGTCGGTGATGCTACCAATGCAGCTGCTGAGGATATAAAAACATTTGCCAGTTCTGTGGTTATCAATAAAAATTCAGTATATCCTCAGAATGCCGGCTATGTAACCACCAAAACAAACATTGTGGAAAAGCTACAAGCTTCTAAGCTCTCAGTTTTTGTAGAAACATTCAGCAATGAGTTTGTATCTCAGGCGTTTGATTTCTTCTCAGATTCAACTGTGGAGATCAACTCGTTTATTCAGGGTGCAGGAATTAACGGGGTCATTACAGACTTCCCTAAAACTGCTCATAGATACTCAAGAAACAAATGCCTAAACTTGGGTAATAGTACACCTCCCTACATGCAACCTGTTGAAGCAGGTAGTCTTTTTGGAGTCATTAGCAATACGTCATTGCCTCCAGCTATGGCTCCACTCCCTCCCTTGACTAAAGATGAAGTGGTAGAGCCACCTCTGCCTCCTGTTGCTAAAATTGCTCCAGCGGCTAGCCCTGCTGCCGGAACCAAGTCCCCACCCGGAAACGCACAGCCTAAGGTTTCTGCTTGCTTCTTCTTGTCAAGTCTTGCTGTGTTTGTAGCTTCTATTCTTCTGCTTTGA 2265 0.4168 MCSPRALSVSLSLFLLLALVSAQTKRSVWNTLTGSPPLVISHGGFSGIFPDSSDSAYILAAATSTPNAALWCDVQLTKDAVGICLPNLNLLNSTNIFGVFPNKTTSYLVNGESTAGYFSVDYSFEDLSTVTVTQGVFSRSPLLDGNNFIINTVDEVLKLVAPQTPGLWLNIQHDAFYSQHNLSMRSFVLAVSRRLHVSYISSPEAGFLRSITKRFNPKTTKLVFRFLNQEDTDPSTNQTYGSFLKNLTFIKTFASGILVPKGYIWPVDASLYLQPHTSLVSDAHKAGLEVFAADFSNDIVISYNYSFDPLAESLQFIDNGEFTVDGVLTDFPLTPSAAIDCFAHIGNNATRRDKTLIISKYGASGDFPACTNLAYNKAIQDGVDVLDCPVQLSKDGTPFCLKSIDLLESTTVAQTSFSDLAMSVPEIKSGRGIFSFNLTWSDIKGLTPSILAPFSKYTLFRNPKAKNAGTFLTLSDFLSLTKNQTSLSGVLIIVENAAYLAEKQGLSVTDVVIKALSNAGYDKPGSQKVYIQSTNSSVLLKFKEKTKYELVYQIDESVGDATNAAAEDIKTFASSVVINKNSVYPQNAGYVTTKTNIVEKLQASKLSVFVETFSNEFVSQAFDFFSDSTVEINSFIQGAGINGVITDFPKTAHRYSRNKCLNLGNSTPPYMQPVEAGSLFGVISNTSLPPAMAPLPPLTKDEVVEPPLPPVAKIAPAASPAAGTKSPPGNAQPKVSACFFLSSLAVFVASILLL* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3342 754 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 13 753 - -
Mtr5g3342 754 SUPERFAMILY PLC-like phosphodiesterases 354 655 IPR017946 GO:0006629|GO:0008081
Mtr5g3342 754 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 13 753 - -
Mtr5g3342 754 SUPERFAMILY PLC-like phosphodiesterases 36 337 IPR017946 GO:0006629|GO:0008081
Mtr5g3342 754 CDD GDPD_SHV3_repeat_1 37 338 - -
Mtr5g3342 754 ProSiteProfiles GP-PDE domain profile. 355 656 IPR030395 GO:0006629|GO:0008081
Mtr5g3342 754 CDD GDPD_SHV3_repeat_2 356 655 - -
Mtr5g3342 754 ProSiteProfiles GP-PDE domain profile. 37 339 IPR030395 GO:0006629|GO:0008081
Mtr5g3342 754 Pfam Glycerophosphoryl diester phosphodiesterase family 362 651 IPR030395 GO:0006629|GO:0008081
Mtr5g3342 754 Pfam Glycerophosphoryl diester phosphodiesterase family 42 334 IPR030395 GO:0006629|GO:0008081
Mtr5g3342 754 Gene3D Phosphatidylinositol (PI) phosphodiesterase 354 656 IPR017946 GO:0006629|GO:0008081
Mtr5g3342 754 Gene3D Phosphatidylinositol (PI) phosphodiesterase 36 337 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3342 Mtr-Chr5 42345166 42351429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3342 15 754 Receptor kinase-like Gene Family AT4G26690 56.258 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3342 - - gmx:100811399 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3342 5 42345166 42351429 Mtr5g3342 5 42345166 42351429 ECH