Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3338 ATGATAAGCCCAAAGTGCAATGAACTTGAAGTAGAAATCAAGAACTTAATCAAGGTATGGCTCAAAGTCCTAGCTTCACTATCTTACTGTTATTTCATATCCTCAAACATTCCAAAAGGCATATTAAGGTTTCTGTCCTTGTCTCCAATTTTTTACCTCTTCACCATCCTACCATTTCAACTCTCTTTAGTTCTCCCAATAGGTATCACTTCCTTCTTCATTACTTGGCTCACAAACTTCAAACTTCTCCTTTTCACCTTTGATTTGGGTCCTCTCTCTTCCAATCCAAAAATCTCTCTTCCTCTTTTTCTCACCTTTGCTTGTCTCCCAATTAGAATCACACAAAAACAAAAACACCCATCAAAATTCAATATTTTGCTACCAATCAAAGCCTTGTTTTTTTGTCTTTTCCTTATAAGCCTAAATGACCAAAAACAAAAGCAAAAGATGCACCCATCAATTATTATTATGGGTCTCTATTGTAGCCTCATATATTTATTATTAGATCTTGTTTTGGGATTTTTTAACATTTTGATTTATTTAGTATTTGGGATTGAGCTTGAATTACCTTCTAATGAGCCTTATTTGTCATCTTCATTGGGTGATTTTTGGGGGAAAAGATGGAACCTCATGGTAACATATATTCTGCGACACACTGTATATATTCCAGTGAGAAAATTAATGTCCAAGACTATATTGGGCCCTCAATGTACTCAATCGGTTGGAATTATTGCAACTTTCTTAGTGTCTGGATTAATGCATGAGCTTCTATTTTACCATGTCACACATGTTACACCCACGTGGGAAGTAACATGCTTCTTTATGCTTCATGGGGTGTGTGTAGTTGTGGAGATTGGTGTGAAGAAGTGGTTGGATCATAAATGGAGAGTACATTGGGCCATATCTGGTCCCACTACGGTGGTGTTTGTGGTGTCCACTGCTGCATGGCTATTCTTTCCACCGTTGTTACGTGATGGTGCTGATCAGAGAACCATTGAGGAGTTCAAATTTTTTGATTGTTTAGTGGGAATGTTTTAG 1038 0.3709 MISPKCNELEVEIKNLIKVWLKVLASLSYCYFISSNIPKGILRFLSLSPIFYLFTILPFQLSLVLPIGITSFFITWLTNFKLLLFTFDLGPLSSNPKISLPLFLTFACLPIRITQKQKHPSKFNILLPIKALFFCLFLISLNDQKQKQKMHPSIIIMGLYCSLIYLLLDLVLGFFNILIYLVFGIELELPSNEPYLSSSLGDFWGKRWNLMVTYILRHTVYIPVRKLMSKTILGPQCTQSVGIIATFLVSGLMHELLFYHVTHVTPTWEVTCFFMLHGVCVVVEIGVKKWLDHKWRVHWAISGPTTVVFVVSTAAWLFFPPLLRDGADQRTIEEFKFFDCLVGMF* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3338 345 Pfam Membrane bound O-acyl transferase family 192 275 IPR032805 -
Mtr5g3338 345 PIRSF Wax_synthase 9 343 IPR017088 GO:0008374
Mtr5g3338 345 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 9 338 IPR044851 GO:0006629|GO:0008374
Mtr5g3338 345 PANTHER (MEMBRANE BOUND O-ACYL TRANSFERASE) FAMILY PROTEIN, PUTATIVE-RELATED 9 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3338 Mtr-Chr5 42304188 42305879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3338 9 334 Miscellaneous Gene Families AT5G55340 43.598 1.23e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3338 - - mtr:MTR_5g094140 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3338 5 42304188 42305879 Mtr5g3338 5 42304188 42305879 ECH