Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3329 ATGGCTCCTATGGAAGAAAATGTTGTTGTGTCCAATTTGGAGCTGGAGAAGTTGTTTAGCATGAAAGGAGGCAAAGGAGAGGCCAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCCAAATCAATGATTCACTTTTTGAGAGAAACCCTAGATAAAGTTAAGCTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGACAAGGCTTTTGTAGTTGCTGATTTGGGGTGTTCATGTGGAAGCAACACCATTAATGTGGTGAATGTGATCATAAATCACATCAATAAGCGTTATGAGGCTTTAGGTTGCAACCCACCTGAATTTTCAGCCTATTTCTCTGATCTTCCTAGCAATGACTTCAACACTCTCTTTCAGCTCCTTCCTCCACTTGCCAATGGTGTTAGCATGGAAGAGTGTTTAGCTGCTGATAACCAAAGGTCCTACTTTGTTGCCGGAGTTCCCGGTTCGTTTTATCGGAGGCTTTTTCCGGCGAGGTCTGTTGATGTTTTTCACTCTGCGTTTTCTTTGCATTGGTTATCTAAGATACCAGAATCAGTGTTGGACAAGAAGTCAATTGCATACAACAAAGGGAAGGTGTTTATTCATGGTGCTAATGAGAGCACAGCCAATGCCTACAAGAGACAGTTCAAAACAGATTTGGCAAGCTTCTTGAGTGCAAGGTCAGTGGAAATGAAGAGAGAGGGGTCCATGTTCTTAGTTTGCTTAGGCAGAACTTCAGTGGACCCCACAGAACAAGGTGGTGCTGGAGTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGACCTTGTACAAGAGGGACTAATTAGCTCTACAAAAAGAGACAATTTTAACATTCCAGTTTATGCACCAAGTATGCAAGACTTCAAGGAGGTAGTTGAAGCAAATGGTTCATTTGTCATAAACAAACTTGAGGTATTCAAAGGAGGAAGTCCCCTTGTTTTGAACAAACCAGATGATGCTAATGAAGTAGGTAGGGCTCTAGCCAACAGCTGCAGGACTGTGTGTGGAGTCCTTGTTGATGCTCACATTGGTGATAACCTTAGTGAGGAGCTCTTCCTTAGAGTGGAGCGCCGAGCCACTAATCGTGCCAAAGAGCTTCTAGAGAAACTACAGTTCTTTCACATAGTCGCATCCCTTTCTTTTAGTCAATGA 1179 0.4394 MAPMEENVVVSNLELEKLFSMKGGKGEASYANNSQAQAIHAKSMIHFLRETLDKVKLGGGGGGGGGGDKAFVVADLGCSCGSNTINVVNVIINHINKRYEALGCNPPEFSAYFSDLPSNDFNTLFQLLPPLANGVSMEECLAADNQRSYFVAGVPGSFYRRLFPARSVDVFHSAFSLHWLSKIPESVLDKKSIAYNKGKVFIHGANESTANAYKRQFKTDLASFLSARSVEMKREGSMFLVCLGRTSVDPTEQGGAGVLFGTHFQDAWDDLVQEGLISSTKRDNFNIPVYAPSMQDFKEVVEANGSFVINKLEVFKGGSPLVLNKPDDANEVGRALANSCRTVCGVLVDAHIGDNLSEELFLRVERRATNRAKELLEKLQFFHIVASLSFSQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3329 392 Gene3D - 19 373 IPR042086 -
Mtr5g3329 392 Pfam SAM dependent carboxyl methyltransferase 69 388 IPR005299 GO:0008168
Mtr5g3329 392 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 11 390 IPR005299 GO:0008168
Mtr5g3329 392 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 389 IPR029063 -
Mtr5g3329 392 Gene3D Vaccinia Virus protein VP39 33 318 IPR029063 -
Mtr5g3329 392 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 11 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3329 Mtr-Chr5 42187262 42192333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3329 K18848 - gmx:100807953 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3329 5 42187262 42192333 Mtr5g3329 5 42187262 42192333 ECH
Mtr3g1363 3 24775523 24780302 Mtr5g3329 5 42187262 42192333 PCT