Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3327 ATGGCCGTAACTGAAGCTCAAAACCCTCTTATTGGAGAGAACACATGTGGTTCCTTGTTGAAGAAGCTGCAGGAAATATGGGATGAGGTTGGTGAAAGTGACGAGGAACGGGACAAGATGCTTCTTCAGTTAGAGCAGGAGTGCTTGGATGTGTACAAGAGAAAGGTTGAACATGCTGCAAAGTCAAGGGCACAACTACTTCAAGCATTGTCTGATGCTAAGCTTGAGCTTTCAACACTTCTATCTGCTCTTGGTGAAAAGGGCTTTGCTGGAATTCCTGATAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTATAGCACCAGCACTTGAACAGCTATGGCAACAAAAGGAAGAAAGGATAAAGGATTTCTCAGATGTACAGTCACAGATTCAAAAAATATGTGGAGAGATAACTGGGAGCTTGAACCTTAATGATGTACCTGCAGTTGATGAGTCGGACCTGACCCTGAAGAAGTTTGAAGAATATCAATCTGAGCTTCAAGAACTTCAAAAGGAAAAGAGTGACAGGTTGCAAAAGGTTTTTGAATTTGTGAGTACTGTGCATGATCTATGTGCTGTCCTTGGTATGGACTTCTTTAGTACGGTAACTGAGGTCCATCCAAGCCTGAATGATTCTACTGGTGTGCAATCCAAAAGCATAAGCAATGAAACTCTAGCCAGGCTTGCTAACACAGTTTTAACGCTGAAAGAAGATAAAAAGCAGAGGTTGCACAAGCTCCAAGAATTAGCTTCTCAATTAATTGATCTGTGGAATCTAATGGATACCCCTCCAGAGGAAAGGAAACTGTTTGACCATGTTACCTGTAACATCTCAGCTTCTGTCGATGAAGTCACTATTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAGAGACTTGACCAGCTTAAAGCAAGCAGGATGAAGGAAATTGCTTTCAAGAAGCAATCAGAACTTGAAGTGATATTTGCTAATGCTCATATAGAAATAGATTCGGATGCTGCAAGAGAGAAGATTATGGCATTGATTGATTCTGGAGACATTGAACCAACTGAATTACTGGCTGATATGGACAATCAAATAGCGAAAGCTCAAGAAGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAGGAGAGCTGGCTTGAGGACTATAATCGGGATGACAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAGAGAGCAGAGAAAGCTCGGATACTGGTAAATAAAATTCCCGCTTTGGTTGATACATTGGTTGCGAAAACACGTGCATGGGAAGAGACTCATGATATGTCATTCACATATGACGGCGTTCCTCTTCTTGCCATGTTAGATGAATATGCCATGCTTAGGCATGAACGGGAAGAAGAAAAACGAAGAATGAGGGATCAGAAGAAATTTCAGGAGCTGCAAAGCACGGAACCAGAGGCCCCCTTTGGTTCAAAACCCAGCCCTGCTAGGCCAGTTAGCGCTGCTAAGAAGGTAGGTGGCCCTCGTGCTAATGGAGGGGCCAACGGTACTCCTAACCGACGGCTATCGCTTAATGCTCATCAAAATGGAAGCAGGTCCATATCAAAAGATGGAAAAAGGGATAATAGACCAGTTGCTCCTGTGAATTATGTGGCCATGTCAAAAGAAGATGCTGCTTCCCACGTTTCTGGTACTGAACCCATCCCAACATCACCCTAA 1749 0.434 MAVTEAQNPLIGENTCGSLLKKLQEIWDEVGESDEERDKMLLQLEQECLDVYKRKVEHAAKSRAQLLQALSDAKLELSTLLSALGEKGFAGIPDNTSGTIKEQLAAIAPALEQLWQQKEERIKDFSDVQSQIQKICGEITGSLNLNDVPAVDESDLTLKKFEEYQSELQELQKEKSDRLQKVFEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGVQSKSISNETLARLANTVLTLKEDKKQRLHKLQELASQLIDLWNLMDTPPEERKLFDHVTCNISASVDEVTIPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQSELEVIFANAHIEIDSDAAREKIMALIDSGDIEPTELLADMDNQIAKAQEEALSRKDILDKVEKWMSACEEESWLEDYNRDDNRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEETHDMSFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKFQELQSTEPEAPFGSKPSPARPVSAAKKVGGPRANGGANGTPNRRLSLNAHQNGSRSISKDGKRDNRPVAPVNYVAMSKEDAASHVSGTEPIPTSP* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3327 582 Coils Coil 238 258 - -
Mtr5g3327 582 MobiDBLite consensus disorder prediction 526 542 - -
Mtr5g3327 582 Coils Coil 297 317 - -
Mtr5g3327 582 MobiDBLite consensus disorder prediction 475 582 - -
Mtr5g3327 582 Gene3D - 367 501 - -
Mtr5g3327 582 Coils Coil 460 480 - -
Mtr5g3327 582 Coils Coil 154 181 - -
Mtr5g3327 582 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 506 - -
Mtr5g3327 582 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 4 582 IPR007145 GO:0000226|GO:0008017
Mtr5g3327 582 MobiDBLite consensus disorder prediction 475 490 - -
Mtr5g3327 582 PANTHER MICROTUBULE-ASSOCIATED PROTEIN, MAP65/ASE1/PRC1-RELATED 4 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3327 Mtr-Chr5 42169656 42174123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3327 13 548 EF-hand Containing Proteins AT5G62250 42.468 4.13e-123 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3327 K16732 - gmx:100806071 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3327 5 42169656 42174123 Mtr5g3327 5 42169656 42174123 ECH