Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3298 ATGGGTTTCAAAGCTTTACTTGTGTGTTCCTTTGTACTATTTTTCTATAGCTATGGTTTCTCAATGGCTCAAATGGTTCCAGCTGTTTATGTTTTTGGAGACTCACTTGTAGATGTTGGAAACAATAATTACTTGACTCTATCTATTGCCAAGGCAAATCATCGTCACTATGGTATTGATTTTCTTAATCACAAACCAACTGGGAGATTTAGCAATGGCAAAAATGCTGCTGATTTTATTGGTGAGAAATTGGGTTTGGCAACTTCACCACCTTACCTCTCCTTAATATCAAAGGGTAACAAAAATGAAAATAATGCATCCTTCATAAATGGTGTTAGCTTTGCTTCCGCAGGTGCTGGAATATTTGATGGTACAGATGAACGCTATAGACAATCGTTACCGTTGACAAAGCAAGTGAACTATTACACAAACGTGTATGAGGAACTAATAAGAGAAGTGGGAGCAAGTGCTTTACAGAAACATCTCTCAAAATCAATTTTTGCTGTTGTGATTGGAAACAATGATCTCTTTGGATATTTTGAGTCATCAGAACTTCGTAAGAAAAATACCCCACAACAGTATGTTGATTCCATGCTTTTCTCACTCAAACTGCAACTACAGCGATTATATGATAATGGTGGGCGTAAATTTGAGATTGCGGGAGTCGGAGCACTTGGATGTTGCCCTATGTTCAGGCTCAAGAACCAAACGGAATGTGTTGTAGAAACCAATTATTGGTCTGTTCAATATAACAAAGGTCTTCAATCCATGTTGAAGGAATGGCAATCAGAGAATCAAGGCATAATCTACTCTTACTTCGACACTTACGTCGCCATGAACGACCTCATTCAAAATCCAGCTTCCTATGGATTTACAGATGTTAAAGCTGCTTGTTGTGGACTAGGAGAGCTAAATGCCAGGGCTCCTTGCCTGCCTGTGTCACATCTTTGTCCCAACAGACAAGACCACATTTTCTGGGATCAATTTCATCCTACAGAGGCAGCTTCGCGTATATTTGTGGACAAAATTTTCGATGGTTCTTCAACTTACACTTCTCCTATTAACATGAGACAGCTAGTAGCAGCCTGA 1089 0.393 MGFKALLVCSFVLFFYSYGFSMAQMVPAVYVFGDSLVDVGNNNYLTLSIAKANHRHYGIDFLNHKPTGRFSNGKNAADFIGEKLGLATSPPYLSLISKGNKNENNASFINGVSFASAGAGIFDGTDERYRQSLPLTKQVNYYTNVYEELIREVGASALQKHLSKSIFAVVIGNNDLFGYFESSELRKKNTPQQYVDSMLFSLKLQLQRLYDNGGRKFEIAGVGALGCCPMFRLKNQTECVVETNYWSVQYNKGLQSMLKEWQSENQGIIYSYFDTYVAMNDLIQNPASYGFTDVKAACCGLGELNARAPCLPVSHLCPNRQDHIFWDQFHPTEAASRIFVDKIFDGSSTYTSPINMRQLVAA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3298 362 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 6 360 - -
Mtr5g3298 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 360 - -
Mtr5g3298 362 Pfam GDSL-like Lipase/Acylhydrolase 29 342 IPR001087 GO:0016788
Mtr5g3298 362 SUPERFAMILY SGNH hydrolase 30 344 - -
Mtr5g3298 362 Gene3D SGNH hydrolase 17 348 IPR036514 -
Mtr5g3298 362 CDD SGNH_plant_lipase_like 27 347 IPR035669 -
Mtr5g3298 362 Coils Coil 361 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3298 Mtr-Chr5 41826877 41830844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3298 26 346 Acyl Lipid Metabolism Gene Families AT4G10950 32.209 4.30e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3298 - - gmx:100777307 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3298 5 41826877 41830844 Mtr5g3298 5 41826877 41830844 ECH