Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3281 ATGGCGTCGTTGTGTGGCCCCACCTGCTTCACGATTCCGGCGACGAATGGCGGCTTACTTCGCCACCGCACTTCACTGACCACCAGAAGAGGGTGTTTGTCAGTTTCCGGCGGAACCTCCTTCTTCCACACCTCTCCTTCATCAAAGCGCTCTTTGTCATTCACATGCTTGAGCATTTCTTCTGATTCCCGAATAGGAATTAAGGAAGCTGTTGAAACAGAAAAAGCACCTGCTGCTTTGGGACCATATTCTCAAGCAAACAAAGTCAACAACATTCTTTTTGTCTCTGGTGTACTTGGTCTTGTCCCTGAGACAGGGAAGTTCGTTTCTGATAATGTTGAAGATCAAACTGAACAGCTTCTCAAAAACATGGGGGAAATTCTTAAAGCTGGTGGTGCCAGCTACTCATCAGTTGTTAAGACAACAATTATGTTGGCTGACTTGAAGGATTTTAAGAAAGTCAATGAGATATATGCTAAATATTTCCCTGCACCTTTTCCTGCTCGTTCAACTTATCAAGTAGCTGCATTACCATTGGATGCCAAGATTGAAATTGAGTGCATTGCAACACTATAA 576 0.4392 MASLCGPTCFTIPATNGGLLRHRTSLTTRRGCLSVSGGTSFFHTSPSSKRSLSFTCLSISSDSRIGIKEAVETEKAPAALGPYSQANKVNNILFVSGVLGLVPETGKFVSDNVEDQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPAPFPARSTYQVAALPLDAKIEIECIATL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3281 191 Gene3D - 66 191 IPR035959 -
Mtr5g3281 191 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 68 190 IPR006056 -
Mtr5g3281 191 CDD YjgF_YER057c_UK114_family 83 189 - -
Mtr5g3281 191 ProSitePatterns Uncharacterized protein family UPF0076 signature. 167 185 IPR019897 -
Mtr5g3281 191 SUPERFAMILY YjgF-like 69 191 IPR035959 -
Mtr5g3281 191 Pfam Endoribonuclease L-PSP 74 190 IPR006175 -
Mtr5g3281 191 PANTHER PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN 1 191 - -
Mtr5g3281 191 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 1 191 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3281 Mtr-Chr5 41691794 41694776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3281 K09022 - gmx:100527559 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3281 5 41691794 41694776 Mtr5g3281 5 41691794 41694776 ECH