Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3273 ATGAGTGTAGTAGGGTTTGACATTGGTAATGAGAATTGTGTCATTGCTGTAGCGAAGCAAGGTGGGGTTGATGTTTTGCTGAATAATGAATCGAACCGTGAAACCCCTGCTGTCGTCTGCTTCGGAGAGAAGCAACGATTTTTAGGGTCTGCTGGTGCTGCCTCTGCTATGATGCACCCGAAATCGATAGTATCTCAAGTCAAGAGACTAATAGGAAGGAGATTTGATGACCCTGATGTTCAAAATGACCTAAAAATGTTTCCTTTCGAGACTTTTGAAGGTTCAGATGGTGGCATTTTGATTCACTTGGAATACTTGAATGAGACTCATAAGTTTACACCGGTTCAAATATTAGGAATGCTCTTTGCTCACTTGAAGACTATAGCTGAAAATGATTTGGGGTCTGCTGTTTCGGATTGTGTTATTGGAGTTCCATCATACTTTACTGACTTGCAGAGACGAGCGTATCTCGATGCGGCAACAATTGTTGGGTTGAAGCCTTTGATGTTAATTCATGATTGCACTGCAACTGGTCTTGGATATGGTGTTTACAAAACAGATTTTCCTCAAGGAGATCCTATTTATGTTGCATTTGTTGATATAGGGCACTGTGATACTCAGGTTTCTATTGCAGCATTTGAAGCTGGGAAAATGAAGATGCTTTCACATGCTTTTGACAGAAACTTAGGGGGTAGAGACTTTGATGAGGTTCTATTTAGACATTTTGCAGCAAAGTTTAAGGAACAGTACGAAATTGATGTGTATTCTAATGCCAGAGCGTGCAATAGGCTGTGTGCCGCGTGTGAGAAGTTGAAGAAAGTTCTGAGTGCAAACTTAGAGGCACCTCTGAACATTGAGTGTTTGATGGATGAAAAAGATGTTAGTGGATTTATCAAGAGGGAAGAATTTGAGAATCTTGCATCAGGATTATTGGATAGAATTTGTATTCCTTGCCACAAAGCATTGGCGGACGCGGGCTTGACTGTTGATAAGATTTATTCGGTTGAGTTAGTTGGTTCAGGTTCAAGAATTCCATCTATAACTGGATTATTAACCTCTCTATTTAAGAGAGAACTCAGCCGAACACTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTTCAGTGTGCAATGCTCAGTCCTGTTTTTCATGTCAAAGAATATGAGGTCCAGGATTCTATTCCTTTTTCTATTGGACTTTCCTCGGACGAAGGTCCAATTTGTGAAGAAACAAATGGTGTACTTTTCCCAAAAGGCCAACCCATTCCTAGTTCTAAAGCTCTTACACTTCAGGGCAGTGATTTGCTCCATTTGGAAGCATTCTATGCTAATCCAGATGAAGTACCAAAGGGGACGTCTCCGAAAATTAGTTGCTTCACGATTGGTCCTTTTCAAAGATCCGGTGAAAGTAAGGCGGTAGTTGAAGTTAGAATTGACCTAAATTTGCATGGTATTGTCAGTATTGAATCATCTACATTGATCGAAGATCGTGTGGAAGATTCTGTTACACCGCGTGAGTATCAATCCAATTCTGAAGCAGGAGATGTTGAACCCATTTCTGAGACGGAACAAAATGACAATGAACATAGTATCAATGAGAAGTGTGGATCTCCACATCGTTCTTCTGATGGTACAAGAAAAGATAAGGCCAACATAAGGGTTCATATACCAGTGAGTGAGAACGTCTATGGTGGAATGACCAAGGCTGAAGTCACGGAAGCTCAAGAAAAAGAACGCCAATTAATGCAGCAGGATATAACAATGGAGTTAACAAAAGACAAGAGGAACTCTTTGGAGTCTTACGTATACGACGTGAGGAATAAGCTCTTAAACGAATACCGAAAATTCGCAAGTGAACAAGAGAAGGATGGCATATCCAGGAGCCTGCTAGAGACTGAGGAATGGCTTTACAGTGAACGTGATGATGAAACAGTACATGCTTATTTTGCAAAACTAGAAGATCTAAAACAGCTGGTGGATCCAATCGAGAACCGGTACAAAGATGAAGAAGAAAGAGTGCAAGCTACCAGAGATTTGTTAGGTTGCATTGTCGAGCATCGCATGTCTGCGGGTTCTCTTCCACAAGAAAATAAAGAACTGATAATCGATGAGTGCAATAAAGCAGAACAATGGCTAAGACAAAAGACGCAACAACAAGATGCTTTGCCTAGGAGCTCTGATCCAGTATTTTGGTCAAGAGATATCAATAGCAAGACACAAGATTTGAACTTAGTATGCCAAAGCATATTGAGCACCGAGGGTTCTTCATTTCCAGAAGAAGACGTAGGGGAAGACAAACAGAATACTTCTGAGCATCAATGA 2325 0.4099 MSVVGFDIGNENCVIAVAKQGGVDVLLNNESNRETPAVVCFGEKQRFLGSAGAASAMMHPKSIVSQVKRLIGRRFDDPDVQNDLKMFPFETFEGSDGGILIHLEYLNETHKFTPVQILGMLFAHLKTIAENDLGSAVSDCVIGVPSYFTDLQRRAYLDAATIVGLKPLMLIHDCTATGLGYGVYKTDFPQGDPIYVAFVDIGHCDTQVSIAAFEAGKMKMLSHAFDRNLGGRDFDEVLFRHFAAKFKEQYEIDVYSNARACNRLCAACEKLKKVLSANLEAPLNIECLMDEKDVSGFIKREEFENLASGLLDRICIPCHKALADAGLTVDKIYSVELVGSGSRIPSITGLLTSLFKRELSRTLNASECVARGCALQCAMLSPVFHVKEYEVQDSIPFSIGLSSDEGPICEETNGVLFPKGQPIPSSKALTLQGSDLLHLEAFYANPDEVPKGTSPKISCFTIGPFQRSGESKAVVEVRIDLNLHGIVSIESSTLIEDRVEDSVTPREYQSNSEAGDVEPISETEQNDNEHSINEKCGSPHRSSDGTRKDKANIRVHIPVSENVYGGMTKAEVTEAQEKERQLMQQDITMELTKDKRNSLESYVYDVRNKLLNEYRKFASEQEKDGISRSLLETEEWLYSERDDETVHAYFAKLEDLKQLVDPIENRYKDEEERVQATRDLLGCIVEHRMSAGSLPQENKELIIDECNKAEQWLRQKTQQQDALPRSSDPVFWSRDINSKTQDLNLVCQSILSTEGSSFPEEDVGEDKQNTSEHQ* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3273 774 PRINTS 70kDa heat shock protein signature 2 15 - -
Mtr5g3273 774 PRINTS 70kDa heat shock protein signature 30 42 - -
Mtr5g3273 774 PRINTS 70kDa heat shock protein signature 140 160 - -
Mtr5g3273 774 PRINTS 70kDa heat shock protein signature 332 348 - -
Mtr5g3273 774 PRINTS 70kDa heat shock protein signature 363 383 - -
Mtr5g3273 774 PRINTS 70kDa heat shock protein signature 388 407 - -
Mtr5g3273 774 PRINTS 70kDa heat shock protein signature 472 488 - -
Mtr5g3273 774 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 667 IPR029048 -
Mtr5g3273 774 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 600 IPR029047 -
Mtr5g3273 774 MobiDBLite consensus disorder prediction 523 552 - -
Mtr5g3273 774 CDD HSPA4_like_NDB 2 381 - -
Mtr5g3273 774 PANTHER HSC70CB, ISOFORM G-RELATED 1 774 - -
Mtr5g3273 774 Coils Coil 653 673 - -
Mtr5g3273 774 Gene3D - 186 360 - -
Mtr5g3273 774 Gene3D - 38 113 - -
Mtr5g3273 774 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Mtr5g3273 774 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Mtr5g3273 774 Pfam Hsp70 protein 3 667 IPR013126 GO:0005524|GO:0140662
Mtr5g3273 774 MobiDBLite consensus disorder prediction 760 774 - -
Mtr5g3273 774 MobiDBLite consensus disorder prediction 505 521 - -
Mtr5g3273 774 MobiDBLite consensus disorder prediction 754 774 - -
Mtr5g3273 774 MobiDBLite consensus disorder prediction 498 552 - -
Mtr5g3273 774 Gene3D Actin; Chain A, domain 4 230 313 - -
Mtr5g3273 774 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 774 - -
Mtr5g3273 774 Gene3D - 5 374 - -
Mtr5g3273 774 Gene3D - 567 678 IPR029048 -
Mtr5g3273 774 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 536 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3273 Mtr-Chr5 41617544 41622682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3273 4 427 Calmodulin-binding Proteins AT1G16030 34.895 3.66e-79 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3273 K09489 - gmx:100795914 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3273 5 41617544 41622682 Mtr5g3273 5 41617544 41622682 ECH