Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3239 ATGGGTGTCCTCGGAGCAATACTAAGACATTTGGACACAACAATAGGGCCCGGAGTAATGCTTCTTTATCCTTTATATGCATCAATGAGGGCAATTGAAAGTCCTTCAACCTTAGATGACCAACAGTGGCTAACATATTGGGTTTTATATTCTTTCATAACTCTCTTCGAGCTTTCAACTTACAAGGTCCTATATTGGTTTCCCATTTGGCCATACATGAAGCTTGTGTTCTGCATATGGTTGGTACTGCCAATGTTCAATGGAGCAGCTTACATATATGAGAATTATGCAAGGACATACGTCAAGAAATTTGGCAACTATGGAAGTTATAATTATCCTGAGGAGTACAAGAAGGTCCTTCATATGATGACTTTCGATGCAAGAAAAGCAGTTGAACGTTATATCGATAGATTTGGCCCAGATGCATTTGAGAGAGTGATTAGAGCAGCTGAGAAAGAAGCAAAGAAGCATTGA 474 0.3945 MGVLGAILRHLDTTIGPGVMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSFITLFELSTYKVLYWFPIWPYMKLVFCIWLVLPMFNGAAYIYENYARTYVKKFGNYGSYNYPEEYKKVLHMMTFDARKAVERYIDRFGPDAFERVIRAAEKEAKKH* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3239 157 Pfam TB2/DP1, HVA22 family 24 99 IPR004345 -
Mtr5g3239 157 PANTHER HVA22-LIKE PROTEINS 3 155 IPR004345 -
Mtr5g3239 157 PANTHER HVA22-LIKE PROTEIN 3 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3239 Mtr-Chr5 41250706 41252089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3239 K17279 - gmx:100779435 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3239 5 41250706 41252089 Mtr5g3239 5 41250706 41252089 ECH
Mtr3g1187 3 21741461 21743315 Mtr5g3239 5 41250706 41252089 PCT
Mtr3g3537 3 49182046 49187192 Mtr5g3239 5 41250706 41252089 PCT