Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2854 ATGCAAATAATGAAGCCACCATTCTCACCTTCTTCCATTCTAAGAAGCAAAGGTCGTTTCTCCCCTTACCTTTTCACCCTTCTAGCTTTCATTCTTTTCGTTACTATTCTCTATGGTGAAGATTTCATGTGCATCTTTGGTGAACAACTCTATAACTACTCTAACCAAGACAAATTCTTCTCCACACCTGAGAGGGTGAAGAAGCAGATCAAGGTGCCATTTGCGGTGGGGAAGACGGAGGAAGGGTGTGATATATTCAGTGGAAGGTGGGTTTGGGACGAGGATACTCGACCGTTGTACGAGGAATCAGAGTGTCCGTACATACAACCACAATTGACTTGCCAAGAACATGGGAGACCCGACAAAGATTACCAACATTGGAGGTGGCAACCACACGGTTGCGATCTTCCTAAATTCAATGCTAGCTTGATGCTTGAAACACTCCGTGGAAAGAGGATGATGTTTGTTGGAGACTCTCTCAATCGTGGTCAATATGTTTCTTTTGTGTGCCTTCTCCATCAACTCATTCCCGAGGATGCTAAATCCATGGAAACCTTTGATTCACTCACTGTTTTCACAGCAAAGGAATACAATGCAACAATAGAGTTCTATTGGGCACCTTTTCTTCTAGAATCAAACTCGGACAATGCTGTTGTTCATAGGATATCAGATAGAATTGTAAGAAAAGGTTCAATAAATAAACATGGTAGAAATTGGAAAGGTGTTGACATTTTGGTATTCAACACTTATCTTTGGTGGATGACTGGCTTGGAGATGAAAATCTTACTTGGATCTTTTGATGATGAAGTAAAAGAGATTGTCACAATTTCTACGGAGGATGCTTATCGTATGGCTATGAAAAGTATGCTTAGATGGGTGAGGTTGAACATGAATCCAAAGAAAACTAGAGTCTTCTTCACTAGCATGTCACCTTCTCATGGAAAGAGTATAGATTGGGGAGGTGAACCAGGAGGAAGTTGTTACAATGAAACAACTTTGATTAATAATTCAACATATTGGGGTTCTGATTCTAGAAAGAGTATAATGCAAGTGATTGGTGAAGTTTTGAGCAAAACAAAAGTTCCAATTACATTTCTTAACATCACACAACTCTCAAGTTATCGTAAAGATGCACACACTTCAATCTATAAGAAGCAATGGAGCCCTTTAACTAAAGAGCAATTATCTAACCCTGTAAGCTATGCTGATTGTGTACATTGGTGTTTACCTGGTCTTCAAGATAATTGGAATGAACTTTTGTTTGCTAAGTTGTTTTATCCTTGA 1284 0.3933 MQIMKPPFSPSSILRSKGRFSPYLFTLLAFILFVTILYGEDFMCIFGEQLYNYSNQDKFFSTPERVKKQIKVPFAVGKTEEGCDIFSGRWVWDEDTRPLYEESECPYIQPQLTCQEHGRPDKDYQHWRWQPHGCDLPKFNASLMLETLRGKRMMFVGDSLNRGQYVSFVCLLHQLIPEDAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVVHRISDRIVRKGSINKHGRNWKGVDILVFNTYLWWMTGLEMKILLGSFDDEVKEIVTISTEDAYRMAMKSMLRWVRLNMNPKKTRVFFTSMSPSHGKSIDWGGEPGGSCYNETTLINNSTYWGSDSRKSIMQVIGEVLSKTKVPITFLNITQLSSYRKDAHTSIYKKQWSPLTKEQLSNPVSYADCVHWCLPGLQDNWNELLFAKLFYP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2854 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 12 427 IPR029962 GO:0016413
Mtr5g2854 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 12 427 - -
Mtr5g2854 427 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 136 422 IPR026057 GO:0016740
Mtr5g2854 427 Pfam PMR5 N terminal Domain 82 135 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2854 Mtr-Chr5 37137851 37141371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2854 - - gmx:100785571 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2854 5 37137851 37141371 Mtr5g2854 5 37137851 37141371 ECH
Mtr3g2207 3 35671804 35677345 Mtr5g2854 5 37137851 37141371 PCT