Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2799 ATGGTTGATTTAGAATGGAAATCAAAGATGCTAAACTCAAATATAGCCCCCAAATCACCAAAACTTTCTTTACCCTTACCAACTTTCCATCTCCCTCTTCCACTTACAACAAACGACATCACAACAGCCTCATCCACACTTTGCACAACATATGACAACTATCTCCACCTCCCTCACCTCCAAACCCTTTGGTACTCATCAACCTTTCCCAACTGGGCCAACGAGCCCATCATAAAACCCGCTTTAACCGCTCTAGAAATCACTTTCTGTCTCATCACAACCGTTTTATCCGACCCAAGACCCTATATCAACAAACGCGAGTGGACTCGACGTGTTGAATCTCTAGCAAAATCTCAAATCCACGTCATCGCATTACTCTGCGATGACGAGGAACAAAACACTAATACTTGTGGCAAAGCTCCGATAACCGAGCTTAGCAAAATATACCAAGACCAATTCAGAAGCTATAGCGAACAAAGCTTGCTACCAAAACTCGCCACGTGGCAGAAATCAAAACAAATAGCACAGAGACTATTTTCCACTGTGGAATCTGAAATGATGACGTGTAATTACACGTTAGGTTTAGGAGAACAAAATTTCAACGGTAAACCGATTCTCCGTTACGACGAAATTTGCAAACCGAATTTCATCCACTCATTAGAAACGACACCGTTTGATCATATCGGAAACCACGAGAACAGAATTCTACACGCGACACACCAGATTTTGGAATCATGGACACGCGCAGCGCGTGTGTTACTAGAGCGCGTGAACAATTCCATTGATAACAAAACATTTGAGAAAACCGCGAGTGAGATTTACGCGGTGGAAAGAATCTGGAAGATTCTAACGGAAATCGAAGATTTACACATGATGATGGATCCAGAAGATTTTCTGAAACTGAAGAAGCAATTAGGTTTAGGAACAAGAACGATGAATGAAATGAAAGAAATTCACGAAACGGTGCCGTTTTGTTTTCGTTCAAAAGAGTTTGTTACAGTAACAAAAATGTGTAGAGATTTGAAGCAGAAGGTGCCGGAAATTTTGGAAGTTGAAGTGGACCCCACGGGTGGGCCAGGGGTAATGGAGGAAGCAATGAAGGTTTATTCAGAGAAGAAAGAGTTTGAGAAGGTTCATTTGTTGCAAGGGTTGCAAGGGATTGAGATAGAAATGAAGAGATTTTTTTATGGTTATAAACAAGTTTTGGTTGTTATGATGGGAAGTAGTGAGATGAATTTGGAATGTTTGAGTAGGATTTTTCTTGAACCTACTTGGTTTCCTAGCTTGGATGCTGCCAAGACTTTTCTTGGGTATTATTGGGAAAATAGTGAGAATAGTAGAAATACTTGGTGA 1353 0.4087 MVDLEWKSKMLNSNIAPKSPKLSLPLPTFHLPLPLTTNDITTASSTLCTTYDNYLHLPHLQTLWYSSTFPNWANEPIIKPALTALEITFCLITTVLSDPRPYINKREWTRRVESLAKSQIHVIALLCDDEEQNTNTCGKAPITELSKIYQDQFRSYSEQSLLPKLATWQKSKQIAQRLFSTVESEMMTCNYTLGLGEQNFNGKPILRYDEICKPNFIHSLETTPFDHIGNHENRILHATHQILESWTRAARVLLERVNNSIDNKTFEKTASEIYAVERIWKILTEIEDLHMMMDPEDFLKLKKQLGLGTRTMNEMKEIHETVPFCFRSKEFVTVTKMCRDLKQKVPEILEVEVDPTGGPGVMEEAMKVYSEKKEFEKVHLLQGLQGIEIEMKRFFYGYKQVLVVMMGSSEMNLECLSRIFLEPTWFPSLDAAKTFLGYYWENSENSRNTW* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2799 450 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 450 - -
Mtr5g2799 450 Pfam Hs1pro-1 N-terminus 1 183 IPR009869 GO:0006952
Mtr5g2799 450 Pfam Hs1pro-1 protein C-terminus 186 442 IPR009743 -
Mtr5g2799 450 Gene3D - 206 310 - -
Mtr5g2799 450 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 208 436 IPR037217 GO:0019441|GO:0020037|GO:0046872
Mtr5g2799 450 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 450 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2799 Mtr-Chr5 36480824 36482510 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2799 - - gmx:100778560 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2799 5 36480824 36482510 Mtr5g2799 5 36480824 36482510 ECH
Mtr3g2140 3 34965570 34967344 Mtr5g2799 5 36480824 36482510 PCT