Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2780 ATGTCTGCATATGGCCATGAGCATATGTATTCTACAAGGAGTCTCTCAGCTGGTTCTGAGATGGGGAGTAGTTTTGTGCTAGAATCAGGTTTCTACATCACATCATTTTCTGCAACAATCTTCATTGCTGGATTTGCCGCTCTTGGACTTTTATTAGTCACTCTGCTAGTTTCAATGGCAATGATGCTACAATCATGTCAAAATAGCAATGGTGGAATTATTGAGCTTAGGAATATAAATAATGACTATAGTTATTGCAAAATTCATTCTCTGCATGCTAAGCTCAATAATTTGGAAGAACATAATGTTCCTAACATTTGTAAGGACCTGGCTTTACAATATATCAAAGGTGGTCAATATGCAAGAGACTTGGATTCAACCAAATCTGTGATTGAGGATTACTTCAATGGTGTTAAACCATCAGAAGATGGTTTTGATGTTGTGTTGATAGACATAGATAGCCTTTTTCAATGGAATCCTCCTCATTCTTCCAATTTGTTACTAAGCATTAGCAATTGTATCATCGACGCAAAGTATTTAAAGCGAGTGCTTATGTTAAGAATATACAAGAACCTTCAAGCTAGTGGTTGGTCTATAATTTTGTTATCAAGAGAGTCAGGAACACACCAAAATGTCACCATCAATCATCTTGTTGATGCTGGATTTAGAGGCTGGTCTTCATTGATGATGAGAGCAGATGATGAAGATTCTACCAAAGAAAATGAATATTTTTCTAGACAAAGGAATGTGATACAGACAAAAGGCTTCAGGATCAAAAGTATCATAAGCAGTCATGTTGATATTTTGACTGTTACAGATGCAGATACAGGAATGCGAAAGTTTTTGCTACCAGACCCTATATGTGACATGTTTGAGCCTCAAAGGAGTGCATAG 894 0.3658 MSAYGHEHMYSTRSLSAGSEMGSSFVLESGFYITSFSATIFIAGFAALGLLLVTLLVSMAMMLQSCQNSNGGIIELRNINNDYSYCKIHSLHAKLNNLEEHNVPNICKDLALQYIKGGQYARDLDSTKSVIEDYFNGVKPSEDGFDVVLIDIDSLFQWNPPHSSNLLLSISNCIIDAKYLKRVLMLRIYKNLQASGWSIILLSRESGTHQNVTINHLVDAGFRGWSSLMMRADDEDSTKENEYFSRQRNVIQTKGFRIKSIISSHVDILTVTDADTGMRKFLLPDPICDMFEPQRSA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2780 297 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 14 291 - -
Mtr5g2780 297 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 185 287 IPR005519 -
Mtr5g2780 297 Gene3D - 80 291 IPR023214 -
Mtr5g2780 297 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 14 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2780 Mtr-Chr5 36225218 36228251 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2780 - - gmx:100802632 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2780 5 36225218 36228251 Mtr5g2780 5 36225218 36228251 ECH
Mtr3g2129 3 34878219 34880608 Mtr5g2780 5 36225218 36228251 PCT