Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2453 ATGCTGCTACCGATTTCAGAGTTTGATCATGCAGAAAAGGGTGATGCATTAAATGCAATGGAACTTGCTTTGTCATTGGAAAGGATAAACAATCAAAAGCTTCTAAATTTACACAGTCTAGCAAATGAAAACAATGATGCACAACTTGCTGACTTTATTGAAAGCCATTTTCTGGTTGACCAGGTGGAAGACATTAAAAAGATATCAGAGTATGTGGCTCAGTTAAGAAGGATGGGCAAAGGACATGGAGTTTGGCACTTTGATCAGATGCTACTTAATGGAGGAGTGGTTGCATGA 297 0.3872 MLLPISEFDHAEKGDALNAMELALSLERINNQKLLNLHSLANENNDAQLADFIESHFLVDQVEDIKKISEYVAQLRRMGKGHGVWHFDQMLLNGGVVA* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2453 98 ProSiteProfiles Ferritin-like diiron domain profile. 1 79 IPR009040 -
Mtr5g2453 98 Gene3D - 1 97 IPR012347 -
Mtr5g2453 98 PANTHER FERRITIN 1 93 IPR001519 GO:0006826|GO:0006879|GO:0008199
Mtr5g2453 98 SUPERFAMILY Ferritin-like 4 93 IPR009078 -
Mtr5g2453 98 ProSitePatterns Ferritin iron-binding regions signature 2. 46 66 IPR014034 -
Mtr5g2453 98 Pfam Ferritin-like domain 12 78 IPR008331 GO:0008199
Mtr5g2453 98 PANTHER FERRITIN-2, CHLOROPLASTIC 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2453 Mtr-Chr5 32193963 32195593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2453 K00522 - gmx:100781581 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2453 5 32193963 32195593 Mtr5g2453 5 32193963 32195593 ECH
Mtr7g1699 7 32567392 32570309 Mtr5g2453 5 32193963 32195593 ECH
Mtr4g0367 4 4374742 4377475 Mtr5g2453 5 32193963 32195593 ECH