Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2257 ATGGATTCTTTGTTGGATCAAGCTACTAGTACATGTTCTCACTGTGATCGAGCTATTCCTGTTGCGAATGTTGACTTGCATTATGCTCATTGCTCAAGGAAACTTCAAAAATGCAAAGTTTGTGGTGATATGGTTCCTAGAAACAATGCTGAGGATCACTATTTAACCACTCATGCGCCAATTTCCTGTTCATTGTGCAGTGAGACAGTGGATCGTGATATCATAGATATCCATACAGGTGAAAATTGCCCTAAAAGGATTGTCACTTGTGATTTCTGTGAGTTCCCATTGCCAGCAATTGATCTAGCTGAGCACCAGGAAGTATGCGGGAATCGAACAGAACTCTGTCACCTTTGTAACAAATATGTTAGACTTCGAGAAAGATACAATCATGAAGCCGGGTGCAATGGTATTCAAGATAGCACTGTGGGCTCTTCAAGGAATGTAAGGGAAACTGAAAGAAATGAAGGTGTTCCGCGAAGGCAGCCACGGAATGAGTACTCAACTAAACGTCTCCTTTTCTCAATAGCTGTCACTGGTGGTATTGCTGTTATACTAGGATCTATGTTCCTACAGAAGAAAACAGATCCCAGCGAGATGCATTAG 606 0.4191 MDSLLDQATSTCSHCDRAIPVANVDLHYAHCSRKLQKCKVCGDMVPRNNAEDHYLTTHAPISCSLCSETVDRDIIDIHTGENCPKRIVTCDFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEAGCNGIQDSTVGSSRNVRETERNEGVPRRQPRNEYSTKRLLFSIAVTGGIAVILGSMFLQKKTDPSEMH* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2257 201 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 6 200 - -
Mtr5g2257 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 57 IPR013083 -
Mtr5g2257 201 SUPERFAMILY TRAF domain-like 11 68 - -
Mtr5g2257 201 MobiDBLite consensus disorder prediction 147 164 - -
Mtr5g2257 201 MobiDBLite consensus disorder prediction 144 164 - -
Mtr5g2257 201 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 6 200 - -
Mtr5g2257 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2257 Mtr-Chr5 29573696 29578746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2257 - - gmx:100811867 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2257 5 29573696 29578746 Mtr5g2257 5 29573696 29578746 ECH