Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2238 ATGGAACACACGGAAATGAACGGTGGTAAGAATGCAGATTCAACACAATGTGTTCGTGTTGCGGTGAATATTCGGCCTCTTATTACCGCAGAGCTTCTTCATGGATGTACCAATTGCATCACCGTTCCTCCTGGTGAACCTCAGGTACAAATTGGGACACATGCGTTTACCTATGATTTTGTATATGGTGGCACCGGATCGCCGTCGTCTGCGATATATAATGACTGTGTGGCTCCGCTGGTTGATGCGTTGTTTCATGGATACAATGCAACAGTTCTTGCTTATGGGCAGACGGGATCCGGCAAGACATATACAATGGGCACTAATTATACTGGAGAAGAAAGTGCTGGTGGAATTATACCCAACGTGATGAGGACCATATTCAAGAGGGTTCAGGATTTGAAAGAAGAGTCTAATGAGTTTTTGATTCGTGTATCTTTTATTGAGATTTTTAAGGAAGAGGTGTTTGATCTGCTTGATCCTAATGCATCTAAAGGAGAATCCGTATGTAATGCAAAGTTTGCTGCCCCTGCTAGAGTTCCAATACAGATTAGGGAGACGTTAAGTGGGGGAATAACCCTGGCTGGTGTGACAGAGCCTGAAGTCAAGACAAAAGAAGAAATGTCGTCTTATCTCTCTCGCGGTTCCATGTCACGTGCCACTGGGAGTACAAACATGAACAGTCAATCAAGTCGTTCACATGCAATATTCACCATCACAATGGAGCAAAAGAACGGCGATGATGTCTTATGTGCGAAGCTACATTTAGTTGATCTTGCTGGTTCTGAACGAGCAAAACGAACTGGTGCGGATGGAATGCGACTGAAAGAAGGAATTCATATCAACAAGGGACTACTGACTCTTGGAAATGTAATAAGTGCATTGGGAGATGAAAGAAGGCGAAAAGAAGGAGGCCATGTACCGTATCGAGATAGCAAGTTAACACGCCTTTTGCAGGATTCTCTTGGAGGGAACAGCAAAACGGTGATGATAGCATGTGTTAGTCCTGCAGACACCAATGCTGAAGAGACGTTAAATACGTTAAAATATGCAAATCGTGCGCGGAACATACAGAACAAAGCAATCATTAATCGCGATCCAATAGGCGCCCAACAACAAAGATTGCAAAGTCGTATTGACCAATTGGAGGCTGAACTTCTGTGTTTTAAAGGTGTTGGTGGTGTACCGTTTGAAGAAATTCAGATCCTCAAACACAAGGTATCCTTACTTGAAGCAAGCAATGCACAGCTGCAACACGAGCTTCACGCCCGTGGACAAATTTGTGAGAGTTTAAAAGAACGTGCTTGTGATGCTCAGGTTGAAAAGGACCAACTGATCATGAAAATAGAAGCACTTCGAAATGGTAGATCATGGGATGAGATTGACTCCAACTCAAACCAGGATTGTGACCTGGTGAAGTCTTATGTTTCAAAGATCCATGATTTGGAAGGCGAGTTGCTGCGTTTGAAAAATCTGAATGTGAAATCAAGCAATTTCGTTGACTGGGTTGATTCAGATGATCTTGGACTCCAGTCAAAGACTGGTTTATTCGGAGATGGAAATGAGTATTCTTCTGACTGTGATGTCAAACCTGTGGACATAACAGATGTGGAACCAGTGGAAATTCATGAAAAGGAGTTAGAACACTCTTCTGCACAACAAAAGTTGGACAGGGAGCTCAAGGAATTGGACAAAAAACTTGAACAGAAGGAGGCTGAAATGAAGCTGGTTAATAATGCTTCAGTTCTCAAGCAACATTATGAAAAGAAACTTAATGAGTTGGAACATGAGAAGAAATTTTTGCAGAGAGAAATTGAAGAACTCAAATCCACCTCTGGAGATAGCACTCACAAATTAAAGGAAGAATATCTTCAAAAGTTGAATGCACTTGAATCACAGGTCTCTGAGCTGAAGAAGAAACAAGATGCTCAGGCTCATCTTTTGAGGCAAAAACAGAAAGGTGATGAGGCTGCAAAGAGACTGCAGGATGAGATCCAAAGAATTAAATCTCAAAAGGTTCAATTGCAACATAAGATTAAGCAGGAGTCTGAACAATTTAGGTTATGGAAAGCTTCACGTGAAAAGGAAGTTCTCCAGCTTAAAAAAGAAGGGAGGAAGAATGAATATGAGAGGCATAAGCTGTTAGCGTTGAATCAGAGAACAAAGATGGTGTTGCAAAGGAAGACAGAAGAAGCATCCTTGGCTACAAAAAGGCTAAAAGAACTTTTGGAATCTCGAAAGGCTTCCTCACGTGAAACTGGTATCAGTGGGAATGGTCCAGGAATTCAGGCTTTGATGCAGACAATAGAGCACGAACTTGAAGTCACTGTCCGAGTACATGAAGTACGTTCGGAGTATCAACGTCAAATGGAAGTGAGGGCTGAAATGGCTAAGGAGAGTGCCAGGTTGAAAGAAGAAGCAGAGATGATGAAGCTAAACAATACAAGCAGTGATGTATCAATGTCTCCGGCTGCAAGAAGTTCAAGGATTTTTGCCCTTGAAAATATGCTTGCCACTTCTTCTACAACACTAGTGTCTATGGCATCTCAGTTATCAGAGGCAGAAGAGCGGGAACGGGTTTTCAGTGGCAAGGGACGCTGGAATCAAGTCCGGTCCCTCGCTGATGCCAAAAATTTAATGAACTTTTTGTTCAATCTAGCTTCTTCCTCTAGGTGTTCTTTGCGAGAAAAAGAATTTATCTGCAGAGATAAGGACATGGAAATATTTGATCTAAAGCAAAAAATAGTTAGTCTAATACGTTCACTTGAACAGTTGAAAAGGCAGAGAGATGGACTTGATCATCAATTGAAGTTGATGAGGTCAGAATCCATGCGAGATTCAGGATATTATGTTGGAGGACATCCTTATGACTTACGGAAGCTGGAAAATCGGCGATCTACCATTTTATTCGAGGATATGGAAATATCAGATGCTGAATCAGATGAGTATGGTGTAGATGCAACTGATGATGAATGGGTAATGTCTGCAAAATTGCACGGCAGGAAAAGAAAATCTAAAGGCGGCGAACATTCAAACTTGGAAAAAAATCATTCAAATACAAGTTCAGATGATGCCAAAACTATTTCAACAGAAGCACCAGATGGACCACCTGTAAAAACTGCATCAGATGTTTGCTGCTCTTGTAGCAAATCCTCTTCTTGCAAAACATCGAAATGCGCTTGCAGAGCTATGGGAATTGGTTGTGGAAGTTCATGCGGTTGCCGGGAAACAAAGTGTGCAAACAGAGAAGGAGGGACTGTAAATGATCCCGGTAGCGACGAAGCAGATAAAAACCGCCTTCTAGCAACTCAAGGTGCTGAGTTGCTTCAGGGTGCATTGGTTGGGCCTGCTGAAGCTAACACTGATCATGGGCCAAGAAAAGCTCTCTCTGACATTGGAAATACACTGACTAAATCAAATGCCATGAAGGGTAACCAGAGAAAGAAATGGCGGAAATCCTCAATAGTTCTTGTTACAGAACCGCCTCCATCTTCATCACAGCCAGGTAATTCAGATGCCCCCAAGAAAGAGAAGAATAACAATAGTGAAGCAAATATATATGAGGATATACCACAGAAAACGCATCCTCCTAAATTTGAAAATGCTTCACTTCCCCCAAAGCCAGAGATTAATTATATTGACACAAAAATCCCTTTGAAAATACCACGGGCCATGCAAAAGCAAGGGTTTTCAAATACTATCCTTCCATTGGGAGACAAGAATGCTAATAAGCAAGATGAGTCAATAAAAAAGGAGCCTGAAGTTGATGCTACAATTCCAATTCGTCCAAAAAGAACACTTGAGAAAGAGAACAATGGGCTTTGA 3825 0.4183 MEHTEMNGGKNADSTQCVRVAVNIRPLITAELLHGCTNCITVPPGEPQVQIGTHAFTYDFVYGGTGSPSSAIYNDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGEESAGGIIPNVMRTIFKRVQDLKEESNEFLIRVSFIEIFKEEVFDLLDPNASKGESVCNAKFAAPARVPIQIRETLSGGITLAGVTEPEVKTKEEMSSYLSRGSMSRATGSTNMNSQSSRSHAIFTITMEQKNGDDVLCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLTLGNVISALGDERRRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAIINRDPIGAQQQRLQSRIDQLEAELLCFKGVGGVPFEEIQILKHKVSLLEASNAQLQHELHARGQICESLKERACDAQVEKDQLIMKIEALRNGRSWDEIDSNSNQDCDLVKSYVSKIHDLEGELLRLKNLNVKSSNFVDWVDSDDLGLQSKTGLFGDGNEYSSDCDVKPVDITDVEPVEIHEKELEHSSAQQKLDRELKELDKKLEQKEAEMKLVNNASVLKQHYEKKLNELEHEKKFLQREIEELKSTSGDSTHKLKEEYLQKLNALESQVSELKKKQDAQAHLLRQKQKGDEAAKRLQDEIQRIKSQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRKNEYERHKLLALNQRTKMVLQRKTEEASLATKRLKELLESRKASSRETGISGNGPGIQALMQTIEHELEVTVRVHEVRSEYQRQMEVRAEMAKESARLKEEAEMMKLNNTSSDVSMSPAARSSRIFALENMLATSSTTLVSMASQLSEAEERERVFSGKGRWNQVRSLADAKNLMNFLFNLASSSRCSLREKEFICRDKDMEIFDLKQKIVSLIRSLEQLKRQRDGLDHQLKLMRSESMRDSGYYVGGHPYDLRKLENRRSTILFEDMEISDAESDEYGVDATDDEWVMSAKLHGRKRKSKGGEHSNLEKNHSNTSSDDAKTISTEAPDGPPVKTASDVCCSCSKSSSCKTSKCACRAMGIGCGSSCGCRETKCANREGGTVNDPGSDEADKNRLLATQGAELLQGALVGPAEANTDHGPRKALSDIGNTLTKSNAMKGNQRKKWRKSSIVLVTEPPPSSSQPGNSDAPKKEKNNNSEANIYEDIPQKTHPPKFENASLPPKPEINYIDTKIPLKIPRAMQKQGFSNTILPLGDKNANKQDESIKKEPEVDATIPIRPKRTLEKENNGL* 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2238 1274 Coils Coil 620 640 - -
Mtr5g2238 1274 Coils Coil 651 685 - -
Mtr5g2238 1274 MobiDBLite consensus disorder prediction 1232 1254 - -
Mtr5g2238 1274 Coils Coil 908 942 - -
Mtr5g2238 1274 Coils Coil 725 745 - -
Mtr5g2238 1274 Pfam Kinesin motor domain 49 357 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g2238 1274 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 15 1252 - -
Mtr5g2238 1274 MobiDBLite consensus disorder prediction 1007 1021 - -
Mtr5g2238 1274 ProSitePatterns Kinesin motor domain signature. 252 263 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr5g2238 1274 MobiDBLite consensus disorder prediction 1116 1179 - -
Mtr5g2238 1274 CDD KISc_KIF4 17 358 - -
Mtr5g2238 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 391 IPR027417 -
Mtr5g2238 1274 Gene3D Kinesin motor domain 7 386 IPR036961 -
Mtr5g2238 1274 MobiDBLite consensus disorder prediction 1158 1175 - -
Mtr5g2238 1274 SMART CXC_2 1041 1085 IPR033467 -
Mtr5g2238 1274 Coils Coil 786 813 - -
Mtr5g2238 1274 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 15 1252 - -
Mtr5g2238 1274 PRINTS Kinesin heavy chain signature 87 108 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g2238 1274 PRINTS Kinesin heavy chain signature 224 241 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g2238 1274 PRINTS Kinesin heavy chain signature 253 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g2238 1274 PRINTS Kinesin heavy chain signature 307 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g2238 1274 MobiDBLite consensus disorder prediction 999 1039 - -
Mtr5g2238 1274 Coils Coil 542 611 - -
Mtr5g2238 1274 Coils Coil 400 420 - -
Mtr5g2238 1274 ProSiteProfiles Kinesin motor domain profile. 17 357 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g2238 1274 SMART kinesin_4 15 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g2238 1274 MobiDBLite consensus disorder prediction 1188 1207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2238 Mtr-Chr5 29298511 29308265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2238 18 421 Miscellaneous Gene Families AT4G39050 37.232 1.19e-60 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2238 - - gmx:100817984 1769.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2238 5 29298511 29308265 Mtr5g2238 5 29298511 29308265 ECH