Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2235 ATGAAGAAGTTTCATCTTTCTAGGGTTTCGGAATCTCTCGATTCCATGGATGCCTTCTATGATTCCTCTTCATATCATCAATCGCACAAGTCTCTCGGTTTATTTTCCTCTGTAGACAAAGTCAAGGCAAAGGATTTTGCTAGTATTCCTTTCATTAATGTTGATGAAGTTGGTGGCAACACGCTGAGAAACTCGTTTGTTAAACTTCATACACATGAGAATTCTGTTGAACCTGAGACAAAGGATACCAGTGGTGATGTATATTTGTCGCTGTCACGTCAGAATGGATCAGTTGGCATTAATTTAGAGGGTGATGAATGTGTGAAAAAAAGTACTACATCAAGAATTCTATTAACAAGCTACTTCCCAGCTTTTCCGAAGCATTTTGACGAATTATATTATCCCAAAGGGGACCTGGATGCTGTTTCCCTAAGTAAGAGTGATGTTAATCTATTACGACCAGATACATGTATGAATGACACAATCATCGATTTTTACCTTCTATATATGAAGAATAAGATACAAGAGAAGGAAAGGGCTAGGTTCCACTTTTTCAATAGTTTTTTCTTTCGAAAGCTGGCTGATTTGGACAAAAATCCCCACAAAGCTTGTGATGGCAAATCTGCATTTCAACGTGTTCGTAAATGGACAAGAAAAGTTAATTTATTTGAAAAAGATTTTGTTTTCATGCCTGTGAACTTCAAACACCACTGGAGCTTAATAGTAATTTGTTATCCTGGCGAAGTGGTTAATATTAATGACAAAGTGCCGGAAAAGTCACTTAGGCTACCCTGTATACTGCATATGGATTCTATCAAGGGATATCATAGTGGTCTGAAAGATCTTGTGCAAAGTTATTTGTGTGAAGAATGGAAAGAGAGGAAGATGGGTACATGTGGAGAAGACCTCTCATCAAGATTCTTGAATATGCGTTTTCTCCAAGCTGCGGTACCACAGCAGGAAAACAAATTTGATTGTGGCCTCTTTTTACTTCATTATCTAGAGCGCTTCCTAGATGAAATTCCATCTGATTTCAACCCTTTGATACTAATCAAGTTCTCCAACTTTCTCAATGTGGACTGGTTTCCACCTGCGGAGGCGTATTTCAAACGAACACTTATCCATAGGTTAATAGTTGAGCTGGTGAAAAACCATGACAATGAAGGCTTTTCCCATGACAATGTTGATGACCGCCACTCCTCAGAATATAAGGACAACAAGATTGGTGGCCAGTGTCATTTAATCAACGGGGAGGCATCAACATCCCATGCTGGCCGGGGAATAGAAATGGCTCCATCTTTTGATACTTCTAGTATGGCTCTTAAAGATCATTTTGAACCAGAAGCTACATTGGGAACTTCACTGAGACATTGCCAATCTTTTGAGCGGCGATCATCTAATCACTGTTTCAATGGTTCAATATTTAAAATGGAGGAAGATATGGATCTCAATGCACATCTACAAGCAGAGCATGTAAAGGCTGAGTCATCTCTAGATACATCAAGTCGTACATCAGATGATTCAGATGACGTAGAGATAATTGAAAATCTCCCAGTTAAAAAAGAATCAAGATCAAATTGGATGTTCTTAGAAAACCTTCGGCCTTTACAAGATACGAATAATTCTACTGCTACTTCCACTTTGCCAGATTTGAATGATCCAGTAGAGTCCATGGAAACTCCCCAAGTTGAAAACGAATCAAGATCATCGCATGAAGATGGACGTAGAGAAAAAAAATGCAAGTCCATAGAAAAGCTTGAGTATTTGCCGGATATGAATGATTCTGTTGATTCTGCTACTACTCTCAATTTGCCTGTTAAAAAAGAATCATCGTATTGGATGTCCATAGAAAATATTCGGCATTTACTACAAAAATGGCATTTGTATCATGTTTCGGATGCAGTACATAACAAGGTCATTGATGATGATGATGTTCAGATTATTGACAACCTAAATCTTGGTTTTTTGAAGGAGCGACCTCCAAAGAAGAGGCGGCGTATGTCTCCTTGGGTGGAAGTCATGGAATCCTGA 2031 0.386 MKKFHLSRVSESLDSMDAFYDSSSYHQSHKSLGLFSSVDKVKAKDFASIPFINVDEVGGNTLRNSFVKLHTHENSVEPETKDTSGDVYLSLSRQNGSVGINLEGDECVKKSTTSRILLTSYFPAFPKHFDELYYPKGDLDAVSLSKSDVNLLRPDTCMNDTIIDFYLLYMKNKIQEKERARFHFFNSFFFRKLADLDKNPHKACDGKSAFQRVRKWTRKVNLFEKDFVFMPVNFKHHWSLIVICYPGEVVNINDKVPEKSLRLPCILHMDSIKGYHSGLKDLVQSYLCEEWKERKMGTCGEDLSSRFLNMRFLQAAVPQQENKFDCGLFLLHYLERFLDEIPSDFNPLILIKFSNFLNVDWFPPAEAYFKRTLIHRLIVELVKNHDNEGFSHDNVDDRHSSEYKDNKIGGQCHLINGEASTSHAGRGIEMAPSFDTSSMALKDHFEPEATLGTSLRHCQSFERRSSNHCFNGSIFKMEEDMDLNAHLQAEHVKAESSLDTSSRTSDDSDDVEIIENLPVKKESRSNWMFLENLRPLQDTNNSTATSTLPDLNDPVESMETPQVENESRSSHEDGRREKKCKSIEKLEYLPDMNDSVDSATTLNLPVKKESSYWMSIENIRHLLQKWHLYHVSDAVHNKVIDDDDVQIIDNLNLGFLKERPPKKRRRMSPWVEVMES* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2235 676 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 620 676 - -
Mtr5g2235 676 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 28 621 - -
Mtr5g2235 676 MobiDBLite consensus disorder prediction 538 564 - -
Mtr5g2235 676 Gene3D - 182 314 - -
Mtr5g2235 676 SUPERFAMILY Cysteine proteinases 134 384 IPR038765 -
Mtr5g2235 676 Pfam Ulp1 protease family, C-terminal catalytic domain 158 346 IPR003653 GO:0006508|GO:0008234
Mtr5g2235 676 MobiDBLite consensus disorder prediction 538 579 - -
Mtr5g2235 676 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 28 621 - -
Mtr5g2235 676 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 620 676 - -
Mtr5g2235 676 MobiDBLite consensus disorder prediction 565 579 - -
Mtr5g2235 676 Gene3D - 134 379 - -
Mtr5g2235 676 ProSiteProfiles Ubiquitin-like protease family profile. 142 337 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2235 Mtr-Chr5 29275893 29281123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2235 K08596 - gmx:100796777 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2235 5 29275893 29281123 Mtr5g2235 5 29275893 29281123 ECH