Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2225 ATGTCGGAATCCGGAAATCTCGGTGTAGTAGTAGTAGCAGTAGACGGAAGCGAAGAGAGCATGAACGCTCTCCGCTGGGCGTTAGAAAATCTCAAGCTCCGATCACCTGCACCCGATTCCACCGACGCTGGTTCTTTCATCATCCTCCACGTTCAATCTCCGCCGTCAATCGCCACCGGTCTTAATCCCGGTTCCATCCCTTTCGGTGGACCCAGTGATCTTGAAGTTCCTGCGTTTGCTGCTGCAATTGAAGCTCATCAGAAACGTATTACTGATTCTATTTTTGATCATGCTTTGGGAATTTGCTCCACCTTCAACACTAAGGTCAGGACTCATGTTGTTGTTGGTGATCCAAAGGAGAAGATTTGTGAAACTGTACAGGATTTGCATGCTGATGTGCTTGTGATGGGGTCTCGGGCTTTTGGCCCTATTAAGAGAATGTTCCTGGGAAGTGTTAGCAACTACTGTGCCCACCATTCTGAGTGTCCAGTCACCATCATCAAAGGAAAGGGCGGTGTTAATAAGGGAAACTAA 534 0.4794 MSESGNLGVVVVAVDGSEESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPAFAAAIEAHQKRITDSIFDHALGICSTFNTKVRTHVVVGDPKEKICETVQDLHADVLVMGSRAFGPIKRMFLGSVSNYCAHHSECPVTIIKGKGGVNKGN* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2225 177 CDD USP_Like 10 167 - -
Mtr5g2225 177 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 170 - -
Mtr5g2225 177 Pfam Universal stress protein family 10 168 IPR006016 -
Mtr5g2225 177 Gene3D HUPs 3 174 IPR014729 -
Mtr5g2225 177 PANTHER OS02G0760500 PROTEIN 4 169 - -
Mtr5g2225 177 PRINTS Universal stress protein signature 7 25 IPR006015 -
Mtr5g2225 177 PRINTS Universal stress protein signature 128 140 IPR006015 -
Mtr5g2225 177 PRINTS Universal stress protein signature 146 168 IPR006015 -
Mtr5g2225 177 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 4 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2225 Mtr-Chr5 29135429 29138826 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2225 - - cam:101499444 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2225 5 29135429 29138826 Mtr5g2225 5 29135429 29138826 ECH