Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2220 ATGGCTTCAATCTCAAGTATTTATTCATCTTCACCAACACTTAACAATCAAAAAAACCAAAACGCATCCTCTATTCCAATACGACGTCGTTCACAACAACATCTCCCTATATACCAAACCCGACCCAAACTCCCTCCAACCCGCTCCGTCGCACGCGAAATTCCAACCGGAACCGATCTCTCCGCTGTGCAATCCACAAACCACCATCGTCTCGAGAAAGATCCACGCGCTTTATGGCGGCGTTACGTGGACTGGCTATACCAGCACAAGGAGATTGGTTTGTATCTGGATGTGAGCCGGGTCGGGTTTACCGATGAGTTTGTGAAGGAAATGGAGCCGAGGTTTCAGGCGGCGTTGAAAGCTATGGAGGAGCTTGAAAAGGGAGCGATTGCGAATCCTGATGAAGGGCGTATGGTTGGGCATTACTGGCTTAGGGATTCCAATCGTGCTCCGAATATATTTCTTAAGACGCAGATTGATAAGACCCTTGATGCTATTTGTGGTTTTGCTGATGATATCGTCTCTGGTAAGATTAAGCCTCCTTCATCCCCTGAGGGAAGGTTTACTCAGATACTTTCTGTTGGGATTGGAGGTTCTGCACTTGGACCACAGTTTGTTGCGGAGGCACTTGCTCCTGACAATCCTCCGCTCAAGATAAGATTTATTGACAACACAGATCCTGCTGGCATTGATCATCAGATTGCACAACTCGGCCCTGAGCTAGCTTCGACACTTGTAATTGTGATTTCAAAGAGTGGAGGCACCCCTGAGACTAGAAATGGCTTGTTAGAAGTACAAAAGGCCTTTCGTGAAGCAGGATTGGATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAACTCTTTGTTGGATAACACTGCCAGAATTGAGGGATGGTTGGCTAGATTTCCCATGTTTGACTGGGTGGGAGGTAGAACGTCAGAGATGTCTGCAGTCGGCCTGCTTCCAGCAGCTCTGCAGACCATTGACATTAGAGAAATGCTTCTTGGTGCATCACTGATGGATGAGGCAAATAGGAGTACTGTGATAAGGAATAATCCTGCAGCTTTACTGGCTTTATCTTGGTATTGGGCTACAGATGGTGTTGGATCCAAGGATATGGTTATCCTTCCGTATAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAATTGGTCATGGAATCTCTGGGCAAAGAATACGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTCTATGGAAATAAAGGAAGCACAGACCAGCATGCCTACATTCAGCAACTGAGGGAAGGTGTGCACAATTTCTTTGCGACGTTCATTGAGGTGCTACGCGATAGACCACCGGGTCATGATTGGGAGCTTGAACCAGGTGTTACATGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCTTTGTATTCTAATGACCGCGAGTCCATCACAGTCACCGTGCAAGAAGTAACACCTCGATCAGTTGGAGCCCTTGTTGCACTGTATGAACGAGCAGTTGGGATATATGCCTCACTTGTCAACATAAATGCTTATCACCAACCTGGCGTGGAAGCTGGTAAGAAAGCAGCAGGAGAAGTATTAGCACTTCAAAAACGAGTGCTGGCAGTGCTAAACGAAGCAAGCTGCAAGGAACCTGTTGAACCTTTGACAATTGAAGAAGTAGCTGAACGTTGCCACGCTCCAGAAGATATTGAAGTAATTTACAAGATTATTGCTCATATGGCTGCCAACGATAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCAAGGAGCGTCAAAGTTTTTCTCGGAGAGTGTAATGTTGATGAAATGTATGCATGA 1854 0.4585 MASISSIYSSSPTLNNQKNQNASSIPIRRRSQQHLPIYQTRPKLPPTRSVAREIPTGTDLSAVQSTNHHRLEKDPRALWRRYVDWLYQHKEIGLYLDVSRVGFTDEFVKEMEPRFQAALKAMEELEKGAIANPDEGRMVGHYWLRDSNRAPNIFLKTQIDKTLDAICGFADDIVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQTIDIREMLLGASLMDEANRSTVIRNNPAALLALSWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEYDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYSNDRESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIEEVAERCHAPEDIEVIYKIIAHMAANDRALIAEGNCGSPRSVKVFLGECNVDEMYA* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2220 617 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 617 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 CDD SIS_PGI_2 372 536 IPR035482 -
Mtr5g2220 617 SUPERFAMILY SIS domain 65 540 IPR046348 GO:0097367|GO:1901135
Mtr5g2220 617 ProSitePatterns Phosphoglucose isomerase signature 2. 513 530 IPR018189 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 MobiDBLite consensus disorder prediction 1 38 - -
Mtr5g2220 617 Pfam Phosphoglucose isomerase 120 447 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 Pfam Phosphoglucose isomerase 478 538 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 PRINTS Glucose-6-phosphate isomerase signature 191 210 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 PRINTS Glucose-6-phosphate isomerase signature 303 321 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 PRINTS Glucose-6-phosphate isomerase signature 379 400 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 PRINTS Glucose-6-phosphate isomerase signature 481 499 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 PRINTS Glucose-6-phosphate isomerase signature 499 513 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 PRINTS Glucose-6-phosphate isomerase signature 513 526 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 CDD SIS_PGI_1 160 326 IPR035476 -
Mtr5g2220 617 Hamap Glucose-6-phosphate isomerase [pgi]. 91 540 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 MobiDBLite consensus disorder prediction 1 51 - -
Mtr5g2220 617 Gene3D - 177 322 - -
Mtr5g2220 617 Gene3D - 323 522 - -
Mtr5g2220 617 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 71 546 IPR001672 GO:0004347|GO:0006094|GO:0006096
Mtr5g2220 617 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2220 Mtr-Chr5 29068314 29078171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2220 K01810 - gmx:100809452 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2220 5 29068314 29078171 Mtr5g2220 5 29068314 29078171 ECH