Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2200 ATGTTTAGCGTTAAGCGTTTAGTTGAATCAAACAATCTAAGTTCTATTCCTTCAAACTACATTTGCCAAACAAATATTCAAGATTATTCCATAGTGTTGAATGAAACAGAAATTATTCCAACAATCGACTTTTCCCAGCTCATATCTTCCAATCCTATGGAACGTTCCATGGCAATCCAAAAACTTGGCAATGCTTGCCGCGATTGGGGTTTCTTTATGCTAATCAATCATGGGGTATCTGAGACGCTGAGGGATGAGGTTTTAAGAACAAGCCAATGCTTTTTCGATCTGCCAAGTGAAGAAAAAAAGGAGTACATAAGTGAAAAGCTATTTGATCCAATTAGATGTGGTACAAGCTTTAATTTGAAGGTAGACAAAACCCTCTATTGGAGAGATTATCTCAAATGTTATGTTCATCCTCAATTTGATGCTCCTTCCAAGCCCCCTGGGTTTAGTGAAACTTTAGAGGAATATACCACAAAGAGTAGGGAAGTTATTGGAGAGTTGCTAAAAGGAATATCACTGAGCTTGAGCCTAGAAGAAAATTACATACACAACATGATGAATGTAGACTCAGGCTCTCAACTTCTTGTTATCAACTATTACCCACCTTGTCCTAAGCCTGAGCTGGTTATGGGTCTACCTGCTCACACAGATCATGGGCTTTTGACCCTCTTAATGCAGAATGAACACAGTGGACTTCAGATTGAACATAATGGCAAGTGGATTCCTGTTAACCCTGTGCCCAACTCCTTTCTCATCAATACTGGGGATCATTTGGAGATAATTACCAATGGGAAATACAAGAGTATTGTTCATCGTGCTGTGGTGATGAATAAGAAAGCTGCAAGAATTTCTGTTGGGACAGCACATGGGCCCACTCTTGACACCATTGTCACCCCTGCACCAGAGCTGCTTAGCAAGGATAACCCCTCAGCATATAGAGGCATTACATACAGAGATTACTTGCAGCTTCAACAAAGTCGTGAATTAGCAAGAAATTCTTGCTTAGATTATATTCGAATTTAA 1029 0.3965 MFSVKRLVESNNLSSIPSNYICQTNIQDYSIVLNETEIIPTIDFSQLISSNPMERSMAIQKLGNACRDWGFFMLINHGVSETLRDEVLRTSQCFFDLPSEEKKEYISEKLFDPIRCGTSFNLKVDKTLYWRDYLKCYVHPQFDAPSKPPGFSETLEEYTTKSREVIGELLKGISLSLSLEENYIHNMMNVDSGSQLLVINYYPPCPKPELVMGLPAHTDHGLLTLLMQNEHSGLQIEHNGKWIPVNPVPNSFLINTGDHLEIITNGKYKSIVHRAVVMNKKAARISVGTAHGPTLDTIVTPAPELLSKDNPSAYRGITYRDYLQLQQSRELARNSCLDYIRI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2200 342 Gene3D - 1 331 IPR027443 -
Mtr5g2200 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 192 293 IPR005123 -
Mtr5g2200 342 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 22 338 - -
Mtr5g2200 342 PANTHER OS08G0480200 PROTEIN 22 338 - -
Mtr5g2200 342 SUPERFAMILY Clavaminate synthase-like 4 330 - -
Mtr5g2200 342 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 145 IPR026992 -
Mtr5g2200 342 Pfam 2OG-Fe(II) oxygenase superfamily 195 288 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2200 Mtr-Chr5 28670155 28673452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2200 4 342 Glycosyltransferase AT5G59530 31.700 3.13e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2200 - - gmx:100798911 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2200 5 28670155 28673452 Mtr5g2200 5 28670155 28673452 ECH