Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2180 ATGTCTCTCTCTTCAACATCTTCCACCTCTCTCATTCCCACCAAATCATTACTCCAACCCACCAAACCAAACCCACCTTCATTCCCCATCGGGCTCAAACCCATGCCCAAACCCAAACCCGGTTCAATCCTCGCCGTTCACGCCGCTGAACCAGCAAAAAACCCGGTCCTCACCGAAAAGCCGAGCAAGCCTCAACCAACCACCATCCCCCGCAATGCATCCACCAAATGGACCATTGACAGCTGGAAATCCAAGAAGGCTCTTCAACTTCCTGAATACCCGAGTCAGGAAGACCTTGAAGCGGTTCTCAAGACACTCGATGCTTTCCCACCGATTGTGTTTGCTGGTGAAGCTAGAACTTTGGAGGAGCATTTGGGTGAAGCTGCTATGGGAAACGCGTTTCTTCTTCAAGGTGGTGATTGTGCTGAGAGCTTTAAGGAGTTTAATGCTAATAATATTCGTGATACTTTCAGGATTATTCTTCAGATGAGTGTTGTTATGATGTTTGGTGGTCAAATGCCGGTTATTAAGGTGGGGAGAATGGCGGGTCAATTTGCGAAGCCAAGATCGGATAATTTTGAGGAGAAGAATGGTGTGAAGCTTCCTAGTTACAGAGGGGATAACATCAACGGTGATGCATTTGATGAGAAATCCAGGACACCGGATCCTCAGAGGATGATCCGTGCTTATTGTCAAGCTGCAGCTACTCTGAATCTTCTCAGAGCTTTTGCTACTGGTGGTTATGCTGCTATGCAGAGGGTTACTCAGTGGAACTTGGATTTCACTGAACAAAGTGAGCAAGGAGACAGGTACCGTGAGCTTGCTAACCGAGTTGACGAGGCCCTTGGATTCATGGCTGCTGCTGGTCTCACTGTTGACCATCCAATAATGAGAACAACTGATTTCTGGACTTCACATGAATGCTTGTTATTGCCATACGAACAATCACTTACTAGGTTGGATTCAACTTCTGGTCTCTATTATGACTGCTCGGCCCATATGATTTGGGTCGGTGAGAGGACCCGACAGCTAGATGGTGCCCATGTGGAATTTCTAAGAGGAGTTGCTAATCCCTTGGGAATCAAGGTAAGTGACAAGATGGATCCAAATGAGCTTGTTAAACTCATTGAGATCTTGAATCCTCAAAACAAACCAGGGAGAATAACTATAATCACTAGAATGGGAGCTGAAAATATGAGGGTGAAGCTTCCACATCTTATCAGGGCAGTGCGTAGAGCAGGACAAATTGTCACATGGGTCAGCGATCCTATGCATGGAAACACCATAAAGGCTCCATGTGGTCTCAAAACTCGCCCCTTCGATGCCATCAGGGCTGAAGTGAGAGCATTCTTTGATGTTCACGAACAAGAAGGAAGCCACCCAGGAGGAGTTCATCTCGAGATGACAGGTCAAAATGTGACCGAGTGCATCGGTGGGTCAAAGATAGTCACATTTGACGATCTTAGCTCACGCTACCACACACACTGCGATCCTAGACTTAATGCTTCACAATCTCTCGAGCTTGCTTTCATCATTGCTGAAAGGCTAAGAAAGAGTAGAATCAGATCACAGCCTCCTCTTGAATCTACTGGATTTTGA 1599 0.4653 MSLSSTSSTSLIPTKSLLQPTKPNPPSFPIGLKPMPKPKPGSILAVHAAEPAKNPVLTEKPSKPQPTTIPRNASTKWTIDSWKSKKALQLPEYPSQEDLEAVLKTLDAFPPIVFAGEARTLEEHLGEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDNFEEKNGVKLPSYRGDNINGDAFDEKSRTPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTEQSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMRTTDFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSKIVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRIRSQPPLESTGF* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2180 532 Gene3D Aldolase class I 263 518 IPR013785 -
Mtr5g2180 532 MobiDBLite consensus disorder prediction 1 73 - -
Mtr5g2180 532 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 77 519 IPR002480 GO:0003849|GO:0009073
Mtr5g2180 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 6 526 IPR002480 GO:0003849|GO:0009073
Mtr5g2180 532 SUPERFAMILY Aldolase 62 517 - -
Mtr5g2180 532 Pfam Class-II DAHP synthetase family 77 513 IPR002480 GO:0003849|GO:0009073
Mtr5g2180 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 6 526 - -
Mtr5g2180 532 MobiDBLite consensus disorder prediction 1 18 - -
Mtr5g2180 532 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2180 Mtr-Chr5 28433714 28438113 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2180 K01626 - gmx:100797019 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2180 5 28433714 28438113 Mtr5g2180 5 28433714 28438113 ECH