Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2179 ATGGCAGTATCATCTGATATTCGTGCTTGGGACGAGTTGATCCCTGATACCTTGGGGCTGATTTTCACGAAACTTTCGCTCTGTGAAAGATTCACCGTGATCCCAAGGGTCTGCAAATCATGGGCCAGTGCTGTAAATGGTCCTTACTGTTGGCAAGAGATAGACATAACTGACTGGTGCAGCTACTCTGAGCCTCCACAAGTTGAGCGGATGGTTCAGATGCTGATTACTAGAAGTTCTGGATCGCTCCGGAAACTCAGCGTTTCTGGTATCCAGACTGAGAGGGTTTTCACATTCATTGCTGATAATGCGGGCTCGCTACAAAACTTACGCCTTCAAAGATGCAACATCAACACTTTTGCTGTTGAACAAATGACCGGAAAGCTTTCTAAGATTTCAATCTTAGATTTGAGCTACTGTCTCAAAATCTGTAGCAGTGATATAGAGACCATTGGGAAGAACTTGAAACATCTGGAAGTTTTCTGCCGGAATATGCATCCGGTAGAAACTTCGGGAAAACCATCAGAAGATGCAGAAGCACTCGCGATTGCCTCTACAATGCCAAAGCTCAAGCGTCTCGAAATGGCTTACAATCTCGTCACCAGTGAAGGTGTTTATAAAATCCTCTCGTCATGTCCTAAGCTAGAAATTTTGGATTTGAGGGGCTGTTGGGGTGTCAAACTTGACACCGTGTCTGTGCAGCAAAAGTTTCCGAAACTTGCGGTTTTGGGGCCTCAAGTTATTGGATATTACGAGATGTTGGAAGATTGCTCGGATATCTCGGATTCTTCTGACTCCGAATATGATGACAGCGACATGGACGAGTATGACTATGATGATGACAGCGATGATGGCATTTGGTATCATCTAGGAGGGATTGAAGAGCTAGAGTTCAGGGCTTATGCAGGAGGTGTCGAAGATGCTGCAATGTATTGGCCTCCATCCCCATGA 951 0.4532 MAVSSDIRAWDELIPDTLGLIFTKLSLCERFTVIPRVCKSWASAVNGPYCWQEIDITDWCSYSEPPQVERMVQMLITRSSGSLRKLSVSGIQTERVFTFIADNAGSLQNLRLQRCNINTFAVEQMTGKLSKISILDLSYCLKICSSDIETIGKNLKHLEVFCRNMHPVETSGKPSEDAEALAIASTMPKLKRLEMAYNLVTSEGVYKILSSCPKLEILDLRGCWGVKLDTVSVQQKFPKLAVLGPQVIGYYEMLEDCSDISDSSDSEYDDSDMDEYDYDDDSDDGIWYHLGGIEELEFRAYAGGVEDAAMYWPPSP* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2179 316 PANTHER F-BOX PROTEIN FBW2 6 316 - -
Mtr5g2179 316 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 6 316 - -
Mtr5g2179 316 Gene3D - 9 50 - -
Mtr5g2179 316 SUPERFAMILY RNI-like 36 240 - -
Mtr5g2179 316 Gene3D Ribonuclease Inhibitor 51 277 IPR032675 -
Mtr5g2179 316 Pfam Leucine Rich repeat 188 208 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2179 Mtr-Chr5 28414317 28416974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2179 - - gmx:100810036 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2179 5 28414317 28416974 Mtr5g2179 5 28414317 28416974 ECH