Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2174 ATGGGTTCTTTAGACATAACAAAGAATCTCTCTCATGTTGTGTGTATCCCATTTCCAGCACAAGGTCACATAAATCCAATGCTCAAACTTGCAAAACTTCTTCATTTTAAAGGTGGTTTTCATGTCACCTTTGTTAACACTGAATATAATCACAAACGTCTTCTTAAAGCTAGAGGTCCTAATTCTCTCAATGGTCTCCCCTCTTTTCGTTTTGAAACCATTCCTGATGGTCTACCTGAGTCTGATGTGGATGTAACACAGGATATTCCTTCCTTGTGTGAATCCACAAGAGCAACTTGTTCACCTCACTTTAAGAAACTTCTTTCAAAACTTAATAATGCTATAGACACCCCTCCTGTTACTTGCATAGTTTCTGATGGTTGTATGAGTTTTACTTTGGATGCTGCTCAAGAACTTAATATCCCTGAAGTGCTTTTTTGGACAACTAGTGCTTGTGGCTTCATGTGCTACATGCAATATCGTAAACTCATTGAAGAGGGCTTAACACCACTCAAAGACTCCAGTTATATAACAAATGGGTATTTGGAGACTACCATAGATTGGGTGCCAGGCATAAAAGAAATCCGATTAAAGGATATCCCAAGCTTCATCAGAACCACAAACCCTAATGATATCATGCTTGATTTTTTACGAGGGGAATGCCAAAGAGCTCAAAAAGCATCTGCAATAATTTTCAACACATTTGACAATTTGGAACACGATGTTTTGGAAGCATTCTCTTCCATTTTACCTCCTGTTTATTCCATTGGTCCCTTGCATTTACTCATAAAAGATGTGACAAATAAGGAATTGGATTCAATTGGGTCCAACCTATGGAAGGAAGAGCCAGAGTGTTTGGAATGGCTAAATAGTAAAGAACCCAATAGTGTTGTTTATGTCAATTTTGGAAGTATCACTGTTATGACAAGTGAACAAATGATTGAGTTTGCTTGGGGACTAAGTAATAGTAAAATGCCCTTTTTGTGGGTCATAAGGCCAGATCTTGTAGCTGGTGAAAATGCTGTTTTGCCTCTAGAGTTTTTGGAAGAGACCAAAAATAGAGGTTTATTATCAAGTTGGTGTCCACAAGAGGAAGTTTTGGGACATTCATCAATTGGAGGGTTTTTGACACATAATGGTTGGAATTCAACGTTGGAAAGTGTTTGTGGTGGTGTTCCAATGATATGTTGGCCTTTTTTTGCTGAACAACAAACTAATTGTAGATTTTGTTGTAATGAATGGGGGATTGGTTTGGAGATTGAAGATGCTAAGAGGGACAAAATAGAGATTCTTGTGAAGGAGTTAATGGAAGGAGAAAAGGGTAAAGAGATGAAAGAAAAAGCTTTGCAATGGAAGAAATTGGCACACAATGCTGCTTCTGGTCCTCATGGATCATCATTTATGAATCTTGAGAACCTCATTCATGATGTTCTCCTCAAGTGA 1443 0.3798 MGSLDITKNLSHVVCIPFPAQGHINPMLKLAKLLHFKGGFHVTFVNTEYNHKRLLKARGPNSLNGLPSFRFETIPDGLPESDVDVTQDIPSLCESTRATCSPHFKKLLSKLNNAIDTPPVTCIVSDGCMSFTLDAAQELNIPEVLFWTTSACGFMCYMQYRKLIEEGLTPLKDSSYITNGYLETTIDWVPGIKEIRLKDIPSFIRTTNPNDIMLDFLRGECQRAQKASAIIFNTFDNLEHDVLEAFSSILPPVYSIGPLHLLIKDVTNKELDSIGSNLWKEEPECLEWLNSKEPNSVVYVNFGSITVMTSEQMIEFAWGLSNSKMPFLWVIRPDLVAGENAVLPLEFLEETKNRGLLSSWCPQEEVLGHSSIGGFLTHNGWNSTLESVCGGVPMICWPFFAEQQTNCRFCCNEWGIGLEIEDAKRDKIEILVKELMEGEKGKEMKEKALQWKKLAHNAASGPHGSSFMNLENLIHDVLLK* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2174 480 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 68 443 IPR002213 GO:0008194
Mtr5g2174 480 Gene3D Glycogen Phosphorylase B; 280 457 - -
Mtr5g2174 480 CDD GT1_Gtf-like 12 463 IPR002213 GO:0008194
Mtr5g2174 480 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 60 476 - -
Mtr5g2174 480 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 8 58 - -
Mtr5g2174 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 474 - -
Mtr5g2174 480 Gene3D Glycogen Phosphorylase B; 12 460 - -
Mtr5g2174 480 PANTHER GLYCOSYLTRANSFERASE 8 58 - -
Mtr5g2174 480 PANTHER GLYCOSYLTRANSFERASE 60 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2174 Mtr-Chr5 28279448 28284447 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2174 1 479 Glycosyltransferase AT1G22360 64.033 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2174 - - gmx:100784251 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2174 5 28279448 28284447 Mtr5g2174 5 28279448 28284447 ECH