Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2172 ATGGGTTCTTTAGGGAAAAAAGAGAACAAACCTCATGTTGTGTGTGTTCCATTTCCAGCACAAGGTCACATAAATCCAATGCTCAAACTTGCAAAACTTCTTCATTTCAAAAGTGATTTTCATGTCACCTTTGTTAACACTGAATACAATCACAAACGTCTTCTTAAAGCTAGAGGTCCTAATTCTCTCAATGGTCTACCCTCTTTTCGTTTTGAAACCATTCCTGATGGTCTACCTGAGTCTGACTTGGATTCAACACAGGATATTCCTTCCTTGTGTGAGTCCACTAGTAAAACTTGCCTACCTCACTTTAAGAAACTTATATCAAAACTTAATAATGCTATAGACACCCCTCCTGTTACTTGCATTATTGGTGATGGTGTTATGAGTTTTACTATAGATGCTGCTGAAGAACTTAACATACCTGCTGTGCTTTTTTGGACCACTAGTGCTTGTGGCTTCATGTGTTACATGCAGTTTCGTCAGTTAATTGAAAAGGGCTTAACACCACTCAAAGATTCAAGTTATTTAACAAATGGGTATTTGGAGACTACAATTGATTGGGTACCAGGCATAAAAGAAATCAGACTAAGAGACATCCCAACTTTCATTAGAACCACAGATCCAAATGATATTGTGCTAAATTTTGCATTAGGTGAATGTCAAAGAGCTCTAAAAGCTTCAGCAATAATTTTAAACACATTTGATGCATTAGAACACAACGTTTTAGAAGCATTCTCATCCATTGATAATTTACCTCCAGTTTATTCAATTGGTCCAATAAATTTTCTCTTAAAAAATGTGACTGATGAAGAATTGAACTCTATTGGATCCAACCTATGGAAAGATGAGACAGATTGTTTAGAATGGCTAGCAAGCAAAGAACCTAATAGTGTTGTTTATGTCAATTTTGGAAGTATCACTGTTATGACAAATGATCAATTAGTTGAATTTGCATGGGGACTTGCTAATAGTAAAAAAACATTTTTGTGGGTAATAAGACCAGATCTTGTGAGTGGTAAAAATGCTGTTTTACCTCAAGAGTTTTTGGAAGAGACCAAAAATAGAGGTTTATTATCAAGTTGGTGTCCACAAGAGGAAGTTTTAGGTCATTCATCAATTGGAGGGTTTTTGACACATAGTGGTTGGAATTCAACGTTAGAAAGTGTTTGTGGTGGTGTTCCAATGATATGTTGGCCTTTTTTTGCTGAACAACAAACTAATTGTAGATTTTGTTGTAATGAATGGGGGATTGGTTTGGAAATTGAAGATGCTAAGAGGGATAAAATTGAGATTCTTGTGAAGGAGTTAATGGAAGGAGAAAAGGGTAAAGAAATGAAAGAGAAAGCTTTGAGGTTGAAAGAATTGGCACATGATAATGCTTATGGGGCATTTGGATCTTCATTGGTGAATTTGGACAACATGATTCATCACGTGCTATTATTGTCATAA 1452 0.3561 MGSLGKKENKPHVVCVPFPAQGHINPMLKLAKLLHFKSDFHVTFVNTEYNHKRLLKARGPNSLNGLPSFRFETIPDGLPESDLDSTQDIPSLCESTSKTCLPHFKKLISKLNNAIDTPPVTCIIGDGVMSFTIDAAEELNIPAVLFWTTSACGFMCYMQFRQLIEKGLTPLKDSSYLTNGYLETTIDWVPGIKEIRLRDIPTFIRTTDPNDIVLNFALGECQRALKASAIILNTFDALEHNVLEAFSSIDNLPPVYSIGPINFLLKNVTDEELNSIGSNLWKDETDCLEWLASKEPNSVVYVNFGSITVMTNDQLVEFAWGLANSKKTFLWVIRPDLVSGKNAVLPQEFLEETKNRGLLSSWCPQEEVLGHSSIGGFLTHSGWNSTLESVCGGVPMICWPFFAEQQTNCRFCCNEWGIGLEIEDAKRDKIEILVKELMEGEKGKEMKEKALRLKELAHDNAYGAFGSSLVNLDNMIHHVLLLS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2172 483 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 68 460 IPR002213 GO:0008194
Mtr5g2172 483 ProSitePatterns UDP-glycosyltransferases signature. 362 405 IPR035595 -
Mtr5g2172 483 Gene3D Glycogen Phosphorylase B; 282 459 - -
Mtr5g2172 483 CDD GT1_Gtf-like 11 472 IPR002213 GO:0008194
Mtr5g2172 483 PANTHER GLYCOSYLTRANSFERASE 60 478 - -
Mtr5g2172 483 PANTHER GLYCOSYLTRANSFERASE 7 58 - -
Mtr5g2172 483 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 475 - -
Mtr5g2172 483 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 60 478 - -
Mtr5g2172 483 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 58 - -
Mtr5g2172 483 Gene3D Glycogen Phosphorylase B; 12 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2172 Mtr-Chr5 28236937 28239868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2172 1 481 Glycosyltransferase AT1G22380 61.237 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2172 - - gmx:100784251 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2172 5 28236937 28239868 Mtr5g2172 5 28236937 28239868 ECH