Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2156 ATGCAGAAGCTAGGAGGATTTCCAATCTCGAAGAGCCTCGATAGATTCAAATCGTTGTACGGTTCAGCGTCCGGAACCGCAAAACCGTTATCATCATCAATCTCTGCGCGTCAATCTTCAGATTCCGTTTCATCGGGAAGTTTCGCGAATTTGAAGCTAACCGCAGAGAAATTAGTGAAAGATCAAGCTTCGGTGAAAACAGATCTTGATATTGCGAATACTAAGCTTAAGAAATCTCTGGAGCATATTCGTGCATTAGAAGAAAAATTGCAGAATGCGTTTAACGAAAACGCGAAGCTTAAGGTGAAGCAGAAGGAAGATGAGAAATTATGGAAAGGACTTGAATCTAAGTTCTCGTCGACTAAGACTTTGTGTGATCAACTTACTGAGACTCTTCAACAGTTGGCTGGTATCGTTCAAGATGCTGAAAAAGATAAAGAGAAGTTGGAAAGTAAACTCTCAGCAAGTTCAGAAGCTCTTGAGAGTTTGAATGAACAGATGAATGGTTTGTCCTTGAAGCTAGATTCTACAGAGGAAACAATTAAAGCTCGTGATAATGAGCTAGTGAAGCTGAAATTTGCTGCTGAAGAAAGGGAAAAGTTTCACAGTGATGAAAAGTGCAGAGCTGCAAATGTTATAGAAGAGAAGGATACCATGATAAAGAATTTAGAAGACATGTTAACTTCTAGTAGATTGGCTACAGAGAATTTGAACTTAAAGTTGGGAGAGCTTCACCTTCAAATAAAAGTCAAAGATGAAGAAATTACACATCACATAAACAGTGAACAGAAATTGGATAAAGAAAAAAGTGATCTGCAATTGTGCAATGCTGATCTTGCTGAAAAGCTTGGCACGTCACTTCAGAAAATAAACAATCTTGAAGGATCACTTCAGGAGATGGCTGCACATTTATTGAATTTAGACAAAGAAAGCTTGAACCTTGTTAACAAGTTTGATGAAATGAACTCTCTCTATACTTCCTGCTTCAACTTGGTCCAGCACGAAAGAGACACTTTCTCGAAGCATGCTCAAAACCAGTATGACGTGCTTCATACTAAGTTCTTGGTATTGTCATCAGAAAAAGATGAAATTCATATGACGAATCAAGAGTTAAGAAGTAGTTTGAATGATCTTCGTAAAGTCCAAGAGGCCACTGTAGCACAGTATACAGAGGATTGTCGATTAGCTGCTGAGAGAATTCAGCGTTTGGAGTCAGAAGCTGAAGCTTTAATCTCAAAAAAGGCAGAAACAGAAGTCACAATTTCCAAATTAGAGGAGAAAGCTGAAATTCTGTTAGGAAGTGTTACATCATCGGAGAACCAAATGCAAGGTCTACTGCTCAAAATTTCAGCTCTAGAGACTGAAAGCAAAGAAAATATGGAAAGAATGCAGGCAGACATATTGAAGAAATCAGAGGAAATTGATACTCTGCAAAAGGAGAGGATGAAAATAGAGCAGAATGCAGACTCTTTTGACAAGGAAGTCCTACAGCTTCGGAACATCTTAGAGGAAAAAGAACAATGCATTTTGCAGCATACAGAAGAGGAAAAGAAGCTGGAAGATCAGATCACAGAGAACCGGTCATTATTAACTGCTGCTGAAAGTAAACTTGCAGAAGCTAGAAATCAATACGATCAAATGGTAGAGAATAAGCAGTTGGAATTGTCAAAGCATTTAAAAGAAATATCTCAAAGAAATGATCAGGCTATTAATGACATTAAAAGGAAGTATGAATTAGAGAAGATGGAGATTGTCAAATTGGAAACAGACAAGGCTGACAAGGCTATTGCAGCAATTGAGGGAAGGTGTGACCAAAAACTTGCAGAGTGCAAAGAAGAATCAAGGAAGCAGTTGATGCACATTCAGGAGGAACATGCTAAGCTGGTTACTCATATGCAGCAGGAACATGATAAGAGGCAACTATGCCTGCAAGCTGAACACAGTGAAAAGTTAAAGCGTGCTCAACTGCAAGCTGAAAATGAACTGAGAGAGAAAACAATGTTTATGAGGAATGACCATGAAGCTCAGATTAAAGCATTGAGGTGTGAACTTGAAGATGAGTGTAGGAAGCTAGAAGAGGAGTTGCATCTCCAGAAATCCAAAGAAGAAAGGCAAAAGGCTTTGCTGCAGTTGCAATGGAAAGTGATGAGTGACAAGCCAAAAGAGGACCCAGAAGTTAATTCAAAACAGGAATACTCCGTTTCATCGATTAAAAGAAGGAGTTCTTTTGGTGGCAAAAGGAGTCAGCATGAACTAGAATCTCCTTACTCTGAAGAAACGGAAGCACCAGTGCCGAAGTTGTTGAAGAAAGTGGAGAACGTAAAACCAGGAAAAGCAGGAGGCATTCCTAAGCATCATAGAAAGGTAACTCGCCATGAATATGAAGTTGAGACTTCTAATGGAAGAACAATTACAAAGAAAAGGAAAACAAGAAGCACTGTCTTGTTCGAGGATCCAAGAAAACAAAAGATAAATACACCAAAAACAAATACCCCTAGAACTTTTGTTAAGAGTCAGAGGGTTGAAGACCATCCTCGTCCTTCAAATATCGGTGATTTGTTTTCAGAAGGGTCTCTAAATCCATATGCAGATGATCCCTATGCATTTGATTAG 2613 0.3892 MQKLGGFPISKSLDRFKSLYGSASGTAKPLSSSISARQSSDSVSSGSFANLKLTAEKLVKDQASVKTDLDIANTKLKKSLEHIRALEEKLQNAFNENAKLKVKQKEDEKLWKGLESKFSSTKTLCDQLTETLQQLAGIVQDAEKDKEKLESKLSASSEALESLNEQMNGLSLKLDSTEETIKARDNELVKLKFAAEEREKFHSDEKCRAANVIEEKDTMIKNLEDMLTSSRLATENLNLKLGELHLQIKVKDEEITHHINSEQKLDKEKSDLQLCNADLAEKLGTSLQKINNLEGSLQEMAAHLLNLDKESLNLVNKFDEMNSLYTSCFNLVQHERDTFSKHAQNQYDVLHTKFLVLSSEKDEIHMTNQELRSSLNDLRKVQEATVAQYTEDCRLAAERIQRLESEAEALISKKAETEVTISKLEEKAEILLGSVTSSENQMQGLLLKISALETESKENMERMQADILKKSEEIDTLQKERMKIEQNADSFDKEVLQLRNILEEKEQCILQHTEEEKKLEDQITENRSLLTAAESKLAEARNQYDQMVENKQLELSKHLKEISQRNDQAINDIKRKYELEKMEIVKLETDKADKAIAAIEGRCDQKLAECKEESRKQLMHIQEEHAKLVTHMQQEHDKRQLCLQAEHSEKLKRAQLQAENELREKTMFMRNDHEAQIKALRCELEDECRKLEEELHLQKSKEERQKALLQLQWKVMSDKPKEDPEVNSKQEYSVSSIKRRSSFGGKRSQHELESPYSEETEAPVPKLLKKVENVKPGKAGGIPKHHRKVTRHEYEVETSNGRTITKKRKTRSTVLFEDPRKQKINTPKTNTPRTFVKSQRVEDHPRPSNIGDLFSEGSLNPYADDPYAFD* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2156 870 Coils Coil 435 455 - -
Mtr5g2156 870 Coils Coil 644 664 - -
Mtr5g2156 870 MobiDBLite consensus disorder prediction 23 46 - -
Mtr5g2156 870 MobiDBLite consensus disorder prediction 718 762 - -
Mtr5g2156 870 MobiDBLite consensus disorder prediction 775 870 - -
Mtr5g2156 870 MobiDBLite consensus disorder prediction 788 824 - -
Mtr5g2156 870 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 1 863 - -
Mtr5g2156 870 Coils Coil 290 310 - -
Mtr5g2156 870 Coils Coil 502 557 - -
Mtr5g2156 870 Coils Coil 460 494 - -
Mtr5g2156 870 Coils Coil 570 590 - -
Mtr5g2156 870 MobiDBLite consensus disorder prediction 24 46 - -
Mtr5g2156 870 Coils Coil 125 180 - -
Mtr5g2156 870 Coils Coil 69 103 - -
Mtr5g2156 870 Coils Coil 386 427 - -
Mtr5g2156 870 MobiDBLite consensus disorder prediction 744 762 - -
Mtr5g2156 870 Coils Coil 670 690 - -
Mtr5g2156 870 PANTHER SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED 1 863 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2156 - - gmx:100788684 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2156 5 27971433 27983774 Mtr5g2156 5 27971433 27983774 ECH