Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2146 ATGGATTCTGGTAATAGTGGAAGTATTTCTTCTAGTGGAGATGAAGAATATGATTCAAGAAATCATCAAACACTTCTCCCTTCAAACTTCTTCAATCAACAACCTACCCTTCAATTTGGTTCCATCTCACACAATCCACAATCATCCCTGCAGTCATTTAATGCTACCTCCACCCCCATTTCTTTGTTTGATCTTTCACCAAACTACCTTCAAAATCTCTCTCATTCACAACAAAACACAAACCCTTTTCCAAATTTACACCCTCAAAATTCTCAACATGGAGTTTCATCATCATCATTATCATCTCAACAACACATAAACCAATGTTTGTTAACAACTCCTCATCAAGGTCAAGCTCAAGCTTTTGGAGTTCATGATGACAACAACAATGCAAGAGCATCACTTTCATCATCATTACCAGCAACAACAACAACAACAACAAACAATGCAGCAAGAAACTCAAAGAAGAGAACTAGAGCATCAAGAAGAGCACCTACGACAGTTCTAACAACCGACACTTCGAATTTTAGAGCCATGGTTCAAGAATTCACCGGTATCCCTGCACCGCCTTTTTCAGGTTCTTCTTACTCTCGTCGTCTTGATCTTCTCACTTCCTCATCTTCTTTAAGATCAAATAATTCCTCTCACTTTGATACATCAAGTTCTTTTTACCCTCTTCGTCCTTCACCACAAAAACTTCATCATCATAACCATCCAAATCCATTGCTTTTATCTTCATCATCATCACATAACATGGTTGATGCAAATGTTAACAATAATTATGAACTACCATCGGATTTGGGTTTACCTTATACTCATCATCATCAACATAACTTCATGATTAGTATGCAAAATCAACAACCTATTCATACATTCAACAACCCTTCATCTTCACAACAGTTTCATCCTTTTAGTAATATAGGAGGGCTTGGTGCAAAGTCACAACAACAGCAAGGAAGTTTATCAGTAAATTCTCTAGAAGATCTAGGGGTGAATCAAGGACAAGGTGTTAATCCACATCTTGGTGTGAATCATGGTCATGATGATGATTATGGTTGTGGTAAAGTTATTGGTTCTTCTTCTTCAGGTGGTGGTGGGGGTGGGGGTGTAGGTAGCAATTGTAAGATTAACTTTTCAGGTTCTGCATCAACCACGTTGAACCATGACAAGACAATGGAGAATAATAATGATAATAGTAGTAATAATAATAATAGAGGAGAAGGTGGTGGTGTTGATTCGTGGATTTGTTCTTCTGATTAG 1260 0.3754 MDSGNSGSISSSGDEEYDSRNHQTLLPSNFFNQQPTLQFGSISHNPQSSLQSFNATSTPISLFDLSPNYLQNLSHSQQNTNPFPNLHPQNSQHGVSSSSLSSQQHINQCLLTTPHQGQAQAFGVHDDNNNARASLSSSLPATTTTTTNNAARNSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSGSSYSRRLDLLTSSSSLRSNNSSHFDTSSSFYPLRPSPQKLHHHNHPNPLLLSSSSSHNMVDANVNNNYELPSDLGLPYTHHHQHNFMISMQNQQPIHTFNNPSSSQQFHPFSNIGGLGAKSQQQQGSLSVNSLEDLGVNQGQGVNPHLGVNHGHDDDYGCGKVIGSSSSGGGGGGGVGSNCKINFSGSASTTLNHDKTMENNNDNSSNNNNRGEGGGVDSWICSSD* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2146 419 MobiDBLite consensus disorder prediction 382 419 - -
Mtr5g2146 419 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g2146 419 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 418 - -
Mtr5g2146 419 MobiDBLite consensus disorder prediction 73 98 - -
Mtr5g2146 419 MobiDBLite consensus disorder prediction 120 167 - -
Mtr5g2146 419 Pfam VQ motif 163 190 IPR008889 -
Mtr5g2146 419 MobiDBLite consensus disorder prediction 207 241 - -
Mtr5g2146 419 MobiDBLite consensus disorder prediction 120 154 - -
Mtr5g2146 419 MobiDBLite consensus disorder prediction 207 227 - -
Mtr5g2146 419 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 418 IPR039609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2146 Mtr-Chr5 27808625 27810702 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2146 - - mtr:MTR_5g063310 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2146 5 27808625 27810702 Mtr5g2146 5 27808625 27810702 ECH