Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2130 ATGGGTCACTTTTCCATCACCATTACCTTCATCTCTTTCATTTTTCTCTTCCTAACTCGCTACCACCGACTCGTTCATGCCGATTCACCAACTCATGTACCTCCATACTCCTGTGACACCACCAACCCACTTACAAAATCCTTACCCTTCTGCAATCTCAACCTTACCATCACTCAAAGAGCCAAAGACATTGTGTCACGGCTCACATTGGATGAGAAAATCTCTCAACTCGTTAACACAGCTCCTTCCATTCCTCGACTCGGTATACCGAGTTACCAATGGTGGGATGAAGCGTTGCACGGTGTTGCTAATGCTGGTAAAGGGATAAGATTGAATGGCAGTGTTGCAGGTGCTACTAGTTTCCCTCAAGTTATTCTTACGGCTGCTTCTTTTGATTCTAAACTTTGGTACCAAATCAGTAAGGTGATTGGAACTGAGGCTAGAGGAGTGTACAATGCTGGACAAGCTCAAGGGATGACGTTTTGGGCACCAAACATAAACATATTTAGGGACCCAAGATGGGGAAGAGGACAAGAAACAGCTGGTGAAGATCCTTTGGTGAATTCAAAGTATGGTGTTTCCTATGTAAGAGGACTTCAAGGAGATTCCTTTGAAGGTGGAAAACTGATTGGAGATCGTCTTAAAGCTTCTGCTTGTTGCAAACATTTTACTGCCTATGATTTGGATAATTGGAAGGGTTTGGACCGTTTTGATTTTGATGCCAAAGTTACTTTGCAAGATTTGGCGGATACGTATCAACCACCATTTCATAGTTGCATAGTACAAGGACGATCCAGTGGAATAATGTGTGCTTACAACCGTGTCAATGGAGTTCCAAACTGTGCAGATTACAATCTGTTAACCAAAACTGCTAGACAAAAATGGAATTTCAATGGGTATATTACGTCGGATTGTGAAGCAGTACGAATCATATATGATAATCAAGGTTATGCAAAAACACCAGAGGATGCTGTAGCCGATGTACTTCAAGCTGGGATGGACGTAGAGTGTGGTGATTACTTGACAAAGCATGCAAAGGCAGCAGTATTACAAAAAAAAGTACCTATATCTCAAATCGACCGTGCCCTACACAATCTGTTTACCATTAGAATAAGACTAGGCTTGTTTGATGGGAATCCAACAAAACTCCAATATGGCAGAATTGGTCCAAATCAAGTATGCTCTAAAGAAAACCTAGACCTTGCTCTTGAAGCTGCAAGAAGTGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCACTTCCAAGAGTAAATACCCTCGGAGTTATAGGCCCTAATGCCAATAAATCATCTAAGGTTGTTTTAGGAAACTACTTTGGCCGTCCTTGTAGATTAGTACCAATATTAAAAGGCTTTTACACTTATGCTAGCCAAACACATTATCGTTCTGGATGTCTTGATGGAACAAAGTGTGCTTCAGCTGAAATTGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTGGACCAAAGTCAAGAGAGGGAATCACGTGATAGAGATGATTTAGAGTTGCCTGGTAAGCAACAGGAACTTATTAACAGTGTTGCTAAAGCTTCTAAGAAGCCTGTTATTTTGGTGCTTTTGTGTGGTGGTCCTGTTGATATTACTTTTGCTAAGAATAATGACAAAATTGGAGGGATTATTTGGGCTGGTTATCCTGGTGAACTTGGTGGAAGGGCTCTTGCTCAGGTTGTGTTTGGTGACTATAACCCAGGGGGGAGACTACCAATGACATGGTACCCAAAAGATTTCATCAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCCTCATCAGGCTATCCCGGTAGAACCTACCGTTTCTACACAGGTCCAAAGGTCTACGAATTCGGCTATGGTCTAAGCTACTCAAATTATTCCTACAACTTTATTTCCGTCAAAAACAACAACCTTCACATCAACCAATCAACCACTCATTCGATACTCGAAAACTCTGAAACAATCTATTACAAACTTGTTTCAGAGTTAGGTGAAGAAACATGTAAAACCATGTCAATTTCTGTCACATTGGGAATTACAAATACTGGAAGCATGGCTGGGAAACATCCTGTGTTGCTGTTTGTGAAGCCAAAGAAAGGTAGAAATGGAAATCCAGTAAAACAGTTGGTAGGGTTTGAGAGTGTGACGGTAGAAGGAGGAGGAAAAGGTGAAGTTGGATTTGAAGTTAGTGTTTGTGAGCATCTTAGTAGAGCAAATGAGAGTGGTGTTAAGGTGATTGAAGAAGGTGGTCATTTGTTGGTTGTGGGAGAGGAAGAGTACTCAATTAATATCACTCTTTGA 2349 0.4095 MGHFSITITFISFIFLFLTRYHRLVHADSPTHVPPYSCDTTNPLTKSLPFCNLNLTITQRAKDIVSRLTLDEKISQLVNTAPSIPRLGIPSYQWWDEALHGVANAGKGIRLNGSVAGATSFPQVILTAASFDSKLWYQISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGDRLKASACCKHFTAYDLDNWKGLDRFDFDAKVTLQDLADTYQPPFHSCIVQGRSSGIMCAYNRVNGVPNCADYNLLTKTARQKWNFNGYITSDCEAVRIIYDNQGYAKTPEDAVADVLQAGMDVECGDYLTKHAKAAVLQKKVPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGRIGPNQVCSKENLDLALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSKVVLGNYFGRPCRLVPILKGFYTYASQTHYRSGCLDGTKCASAEIDRAVEVAKISDYVILVMGLDQSQERESRDRDDLELPGKQQELINSVAKASKKPVILVLLCGGPVDITFAKNNDKIGGIIWAGYPGELGGRALAQVVFGDYNPGGRLPMTWYPKDFIKIPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNFISVKNNNLHINQSTTHSILENSETIYYKLVSELGEETCKTMSISVTLGITNTGSMAGKHPVLLFVKPKKGRNGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGHLLVVGEEEYSINITL* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2130 782 Gene3D - 395 640 IPR036881 GO:0004553|GO:0005975
Mtr5g2130 782 PANTHER SUGAR HYDROLASE-RELATED 1 781 IPR044993 GO:0009044|GO:0045493
Mtr5g2130 782 SMART Fn3_like_2 705 775 IPR026891 -
Mtr5g2130 782 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 1 781 - -
Mtr5g2130 782 Pfam Glycosyl hydrolase family 3 N terminal domain 116 366 IPR001764 GO:0004553|GO:0005975
Mtr5g2130 782 Gene3D Immunoglobulins 668 781 IPR013783 -
Mtr5g2130 782 Pfam Fibronectin type III-like domain 707 773 IPR026891 -
Mtr5g2130 782 Pfam Glycosyl hydrolase family 3 C-terminal domain 410 639 IPR002772 GO:0004553|GO:0005975
Mtr5g2130 782 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 410 642 IPR036881 GO:0004553|GO:0005975
Mtr5g2130 782 PRINTS Glycosyl hydrolase family 3 signature 121 140 IPR001764 GO:0004553|GO:0005975
Mtr5g2130 782 PRINTS Glycosyl hydrolase family 3 signature 216 232 IPR001764 GO:0004553|GO:0005975
Mtr5g2130 782 PRINTS Glycosyl hydrolase family 3 signature 290 308 IPR001764 GO:0004553|GO:0005975
Mtr5g2130 782 SUPERFAMILY (Trans)glycosidases 48 408 IPR017853 -
Mtr5g2130 782 Gene3D - 60 384 IPR036962 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2130 Mtr-Chr5 27475520 27481439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2130 34 782 Glycoside Hydrolase AT1G78060 63.745 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2130 - - gmx:100780688 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2130 5 27475520 27481439 Mtr5g2130 5 27475520 27481439 ECH