Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2125 ATGAAAAACTGTATCAACCTCAAAATATGGTTTCTTAACTTGATTATTATGTTGTTTGTTATGCTTTCTACCACACATGGGAGACCAAATCAGAAGTTTAGATTGAAAGCAGTTAACCTTGGTGGTTGGTTGGTTACTGAAGGTTGGATCAAACCTTCTCTCTTTGATGCCATTCCAAGTAAAGACTTCTTGGATGGAACGGGTCTTCAGTTCAAATCTGTAACAACGAAGAAATATTTGTGTGCTGAGTCTGGAGGAGGAACTATCCTTGTTGCAAACCGCTCAAGTGCTTCTGGTTGGGAAACATTTAAATTGTGGAGAATAAACAAAGAAACTTTCAGATTTAGGGTGTTTAACAAACAATTTGTGGGGTTGGATGGATATAACGTTGTTGCTGTTTCTAATTCTTCCATTGATTCTGAAACTTTCCATATTGTTAAGGAAAATGATAATTCCACCCGTGTTCGAATCAAAGCTTCAAATGGATACTTCTTACAGGTAAAGACGGAAGAGGTAGTGACTGCTGATGTATCATTGGTCAACGAATGGAGAAATGATGACCCAACAATTTTTGTAATGACAATTTCTGATAGGATGCAAGGTGAATTCCAAATAACAAATGGTTATGGGCTCAAGAAAGCTCCACAAATAATGAAGGAACATTGGAGCACTTTTATAGTTGAAGATGATTTCAAATTCATAGCTAGGAATGGATTAAATGCAGTTAGAATTCCAGTGGGTTGGTGGATAGCAAGTGATCCAACTCCACCATGGCCTTATGTGGGAGGTTCATTGCACGCACTAGACAATGCATTTTTGTGGGCTGAAAAATATGGATTGAAAGTGATGATTGATCTTCATGCAGCACCTGATTCTCAAAATGGCTATGAGCATAGCTCTTCAAGAGATGGAGCACAAGAATGGGGCAAAACAGATGAAAGTATCAAACAAACTGTTCAAGTCATTGACTTCTTAACTGCAAGGTATGCAAAAAGTCCAAGTCTTTATGCAGTTGAACTTCTAAACGAGCCTAGGTCACCTGATGCAACACTAGAAAGTTTGAACAAATACTACAAGGATGGTTATGAAGCAGTGAGAAAGCACTCTTCTACTGTATTTGTGGTGTTCTCAAATAGATTAGGATCCTCCATGCCTAGAGAATTCTTCCCTCTTGCTAATGGCCTTATGGGATCAGTGATTGATGTCCACTACTACAGCATCTTTGGAGATGAGTTTACAAACATGAGTGTTCAACAAAATATTGATTATATTTACAATAATCGATCATCGGATTTGAATTTTGTTACAACCTCAAATGGTCCTCTTATTTTTGTCGGTGAATGGGTTGCTGAGTGGCAAGTTAAAGGAGCTATAAAAAATGACTACAAAAGATTTGGTAAGGCTCAATTAGATGTTTATGGGAGAGCAACATTTGGGTATGCTTATTGGGCATTCAAAAACGTGAACAAACACTGGAGTCTAGAATGGATGATGAAGAATGGTTATATCAAGTTCTAA 1518 0.3762 MKNCINLKIWFLNLIIMLFVMLSTTHGRPNQKFRLKAVNLGGWLVTEGWIKPSLFDAIPSKDFLDGTGLQFKSVTTKKYLCAESGGGTILVANRSSASGWETFKLWRINKETFRFRVFNKQFVGLDGYNVVAVSNSSIDSETFHIVKENDNSTRVRIKASNGYFLQVKTEEVVTADVSLVNEWRNDDPTIFVMTISDRMQGEFQITNGYGLKKAPQIMKEHWSTFIVEDDFKFIARNGLNAVRIPVGWWIASDPTPPWPYVGGSLHALDNAFLWAEKYGLKVMIDLHAAPDSQNGYEHSSSRDGAQEWGKTDESIKQTVQVIDFLTARYAKSPSLYAVELLNEPRSPDATLESLNKYYKDGYEAVRKHSSTVFVVFSNRLGSSMPREFFPLANGLMGSVIDVHYYSIFGDEFTNMSVQQNIDYIYNNRSSDLNFVTTSNGPLIFVGEWVAEWQVKGAIKNDYKRFGKAQLDVYGRATFGYAYWAFKNVNKHWSLEWMMKNGYIKF* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2125 505 MobiDBLite consensus disorder prediction 292 311 - -
Mtr5g2125 505 SUPERFAMILY Actin-crosslinking proteins 69 183 IPR008999 -
Mtr5g2125 505 Pfam Cellulase (glycosyl hydrolase family 5) 218 487 IPR001547 GO:0004553|GO:0071704
Mtr5g2125 505 PANTHER PUTATIVE-RELATED 7 504 - -
Mtr5g2125 505 SUPERFAMILY (Trans)glycosidases 32 503 IPR017853 -
Mtr5g2125 505 Gene3D - 45 182 - -
Mtr5g2125 505 Gene3D Glycosidases 183 505 - -
Mtr5g2125 505 PANTHER FASCIN 7 504 IPR010431 GO:0007015|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2125 Mtr-Chr5 27413430 27418201 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2125 - - gmx:100790619 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2125 5 27413430 27418201 Mtr5g2125 5 27413430 27418201 ECH