Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2099 ATGGCGAGAAAATCAACCAATTGCGCCATTTGCGAGAATTTGAATCAACCTTCTATTTGTTCTGTTTGTGTTAACTATAGGTTAAATGAGTATAACAGTTCGTTGAAATCATTGAAAGAGCGTCGAGATTCGTTGTACTCGAAATTGAGTGAAGTTCTTGTTCGTAAGGGAAAGGGAGACGATCAAACAAATTGGAGAGTGCTTCGACATGAAAAGCTTGCAAGGTCAAGGGAGAAGCTCCGCCATAATAAAGAACAAGTTACTCAAGGAAGAGCTAAGATACAGGCTATGTCTGCTGATCTGAAACTTAAATACGGAGTGCTTGAATCTGCCCTTTCTATGTTAGAAAAGAATCGAGTGGAACAACTGGAGAAGTTCTACCCTAATCTTATATGCACCCAGAGCTTAGGGCATGTGGCGATTACCTCTGAGCGTCTTCATAAACAGTCTGTGGTCATAAAACAGATATGCAAGTTGTTTCCACAACGCCGGGTAGTTATAGAGGGAGAGAAAGGGGATGATTGTAGTGGCCAATATGATCAAATTTGTAATGCACGCTTACCAAGAGCACTTGATCCCCATTCTGTTCCTTCAGAAGAGCTTTCTGCATCTTTAGGATACATGGTGCAACTTCTAAATCTTGTTGCTCACAACTTGGCTGCCCCAGCACTTCATAACTCAGGTTTTGCGGGTTCTTGCTCTCGAATATGGCAACGAGATTCTTATTGGGATGCACGACCTTCCTCGAGGAGCAATGAATATCCTCTTTTTATACCTCGCCAAAATTATTGCTCGACTAGTGGGGAAAACTCATGGTCTGAAAAAAGTTCAAGCAATTTTGGTGTTGCTTCAATGGAATCTGACAGGAGGCCTCGTCTCGATTCATCTGGGAGTAGTAGCTTTAACTATTCTTTAGCTTCTTCACATTCTGTTCAATCACACAAAGATCTGCAGAAAGGAATTTCACTTTTAAAGAAAAGTGTAGCATGCATTACTGCATACTGTTACAACTCCCTATGTTTTGACATCCCTTCTGAGGCATCTACGTTTGAAGCATTTGCGAAGTTATTGGCTACTCTCTCATCATCCAAGGAAGTTCGATCTGTTTTCTCTTTGAAAATGGCTCGCTCTAGGACATGCAAACAAGTTCAACAATTGAACAAATCTGTATGGAATATGAACTCCGCTAATTCGTCAACTACTTTGCTGGAAAGTACACATTCTGTTCCCACAACGAGAATTGAAAATTACATGCCAAATTCTGCTGCTAGTTTTCTTTATCCGACTGATTCATCTGATCGAAAAAGTGAGTGCCTAATTGAAGGGTGGGATATTGTTGAGCATCCCACTCTTCCTCCCCCTCCATCACAAAGTGAGGATGTTGAACACTGGACTCGAGCCATGTTCATAGATGCTAAAAGGAAATGA 1428 0.4125 MARKSTNCAICENLNQPSICSVCVNYRLNEYNSSLKSLKERRDSLYSKLSEVLVRKGKGDDQTNWRVLRHEKLARSREKLRHNKEQVTQGRAKIQAMSADLKLKYGVLESALSMLEKNRVEQLEKFYPNLICTQSLGHVAITSERLHKQSVVIKQICKLFPQRRVVIEGEKGDDCSGQYDQICNARLPRALDPHSVPSEELSASLGYMVQLLNLVAHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTSGENSWSEKSSSNFGVASMESDRRPRLDSSGSSSFNYSLASSHSVQSHKDLQKGISLLKKSVACITAYCYNSLCFDIPSEASTFEAFAKLLATLSSSKEVRSVFSLKMARSRTCKQVQQLNKSVWNMNSANSSTTLLESTHSVPTTRIENYMPNSAASFLYPTDSSDRKSECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2099 475 MobiDBLite consensus disorder prediction 268 284 - -
Mtr5g2099 475 PANTHER DNA-DIRECTED RNA POLYMERASE II PROTEIN 1 475 - -
Mtr5g2099 475 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 1 475 - -
Mtr5g2099 475 Coils Coil 28 48 - -
Mtr5g2099 475 MobiDBLite consensus disorder prediction 268 296 - -
Mtr5g2099 475 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 366 IPR018791 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2099 - - mtr:MTR_5g061040 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2099 5 26934957 26944083 Mtr5g2099 5 26934957 26944083 ECH