Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2072 ATGCATCCTTTCTGCTGCATCTCCGCAGTCTCCGATCATCAATCTCCCGCTCATCTCTCCATGCCTCCTCTTCCTTCCTCCACCTCACCTCGCTCCGAATCTTCCTCCGCAGCAATCTCCGCTAACGGAGGAGGTGATTGCAGCCGCGGAAGTCAGCTCGCGGTGGTTCATACGGCGGTTGACGTTAGGATCAACGACCTCGTTGGGAATGGAATATCTGGAATACTTCAGAAATGGGTGAATTACGGTAAAGGATGGAGGCATCGATGGTTTGTGTTGCAAGATGGTGTTCTTTCTTATTACAAGATTCATGGACCTGATAAGATTGTAATCAATCCTGAAACTGAGAAAGGATTCAAGGTTATTGGCGATGAATCCATGCGTATTATCAATCGTAACAGAAATTCTCATCACTCTCAAAATTGGCGTAAGCCTTTCGGTGAAATCCACCTCAAGGTTTCAACTATTCGCGAGAGCAGATCCGATGATAAACGGTTTTCCATTTTCACCGGGACAAAGACACTGCACTTGAGAGCTGAGACTCGTGATGATCGAGTGGCATGGGTGGAGGCTTTGTATGCGGTCAAAGATATGTTTCCTCGGATGTCCATCAGTGAGCTGATGGCTCCAGTGGACAATACGGCCGTTTCAACTGAAAAGCTAAGGCATCGGCTTATGGAAGAAGGTGTTAGTGAAGAAGCTATTCAGGATAGTGAGCAAATTATGAGGAATGAGTATGCTGCTCTACAAAACCAGCTATTGCTACTTAAGCAGAAGCAGTTGGCACTAATCGACAATTTACGCCATTTGGAGACAGAGAAGGTTGACCTGGAAAACACTGTTGTTGATGAGAGCCAAAGACAATGGAATGGCCAACAGGCTTCATCAATGATGAGGCAGGAAAAGTTTAGTGAGGTTAGTGCAAGTGGGTCTGAGGATGATAATGAGAGAAATGATGCAGCAGAGGAAGAAACAGATGATGATGATACCCCCTTTTTTGACACCCGTGATTTTATATCATCATCCAGTTCTGTTAGGGCTTCATCCTTTTCTTCAGATGATGAAGGGATCTCTGTAGTTGGATCCGAGGGGGATATAGATCCTTCTATTAGATCTGTTGGGACTAACTACCCCCACGTCAAGCGGCGGAAAAAATTGCCTGAACCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCATTGATTAAGGATAATATTGGGAAGGATCTAACTAAAGTATGTCTCCCTGTTTATTTTAATGAACCTCTCTCCTCTCTTCAAAGATGCTGTGAAGAAATGGAGTACTCATATCTCCTTGACCGAGCTTATGAATGGGGAAAAAGAGGCAATACCCTTATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGATGGGAGAAATTGTAAACCGTTTAATCCATTACTAGGGGAGACATATGAGGCGGAATTTCCAGATAAAGGTTTTCGTTTCATCTCAGAGAAGGTCAGTCACCACCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCAGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAACTTGATCCTGTTGGTATTTTGACATTAGAATTTGATGATGGTGAAATATTCCAGTGGAGCAAGGTTACTACATCAATATACAATATCATTTTGGGAAAGCTGTATTTGGATCACTATGGTACAATGCGCATTCAGGGAAACCAAGAATACTCATGTAAACTGAAATTCAAGGAACAATCTATGATTGATCGCAATCCTCACCAGGTTCAAGGTACTGTTCAGGATAGAAATGGGAAAACATTGGCTACATTAATGGGAAAGTGGAATGACAGCATGTATTATGTTAATGGAGAATATGGTGGAAAGGGGAAAGGTTATGAATCTCTGCCAGAAGCGCAAATACTATGGAAGCGGAGCAAGCCTCCCAAGTTTCCTACTAGATATAACTTAACTCGTTTTGCCATCACATTAAATGAACTTACCCCAGGATTAAAGGAAAAGCTGCCACCTACGGATTCCAGGTTAAGACCAGATCAGAGGTATTTGGAAAATGGGGAGTACGAGATGGGAAATTCAGAAAAATTACGGCTAGAGCAGCGACAACGGCAGGCTCGGAAGATGCAAGAGAGTGGTTGGGAACCACAATGGTTTGCTAGGGATAAAACAAGTGGTACCTACCGCTACGTAGGAGGATATTGGGAAGCCCGGCAGCAAGGAAGTTGGAATTCTTGTCCTAATATTTTTGGTCAAATTCCTTCTGAGCATCTTTTAGATGAAGGTTCAACTACATTGTAG 2340 0.4325 MHPFCCISAVSDHQSPAHLSMPPLPSSTSPRSESSSAAISANGGGDCSRGSQLAVVHTAVDVRINDLVGNGISGILQKWVNYGKGWRHRWFVLQDGVLSYYKIHGPDKIVINPETEKGFKVIGDESMRIINRNRNSHHSQNWRKPFGEIHLKVSTIRESRSDDKRFSIFTGTKTLHLRAETRDDRVAWVEALYAVKDMFPRMSISELMAPVDNTAVSTEKLRHRLMEEGVSEEAIQDSEQIMRNEYAALQNQLLLLKQKQLALIDNLRHLETEKVDLENTVVDESQRQWNGQQASSMMRQEKFSEVSASGSEDDNERNDAAEEETDDDDTPFFDTRDFISSSSSVRASSFSSDDEGISVVGSEGDIDPSIRSVGTNYPHVKRRKKLPEPVEKEKGVSLWSLIKDNIGKDLTKVCLPVYFNEPLSSLQRCCEEMEYSYLLDRAYEWGKRGNTLMRILNVAAFAVSAYASTDGRNCKPFNPLLGETYEAEFPDKGFRFISEKVSHHPMIVACHCEGTGWKFWADSNLKSKFWGRSIQLDPVGILTLEFDDGEIFQWSKVTTSIYNIILGKLYLDHYGTMRIQGNQEYSCKLKFKEQSMIDRNPHQVQGTVQDRNGKTLATLMGKWNDSMYYVNGEYGGKGKGYESLPEAQILWKRSKPPKFPTRYNLTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMGNSEKLRLEQRQRQARKMQESGWEPQWFARDKTSGTYRYVGGYWEARQQGSWNSCPNIFGQIPSEHLLDEGSTTL* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2072 779 MobiDBLite consensus disorder prediction 286 305 - -
Mtr5g2072 779 SMART PH_update 70 199 IPR001849 -
Mtr5g2072 779 Gene3D - 483 656 - -
Mtr5g2072 779 Pfam Oxysterol-binding protein 397 751 IPR000648 GO:0008289
Mtr5g2072 779 Coils Coil 239 259 - -
Mtr5g2072 779 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 769 - -
Mtr5g2072 779 SUPERFAMILY Oxysterol-binding protein-like 392 768 IPR037239 -
Mtr5g2072 779 Coils Coil 267 287 - -
Mtr5g2072 779 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 769 IPR000648 GO:0008289
Mtr5g2072 779 MobiDBLite consensus disorder prediction 316 331 - -
Mtr5g2072 779 CDD PH_ORP_plant 72 204 - -
Mtr5g2072 779 Gene3D - 70 199 IPR011993 -
Mtr5g2072 779 MobiDBLite consensus disorder prediction 286 375 - -
Mtr5g2072 779 Pfam Pleckstrin homology domain 78 192 - -
Mtr5g2072 779 ProSiteProfiles PH domain profile. 69 197 IPR001849 -
Mtr5g2072 779 MobiDBLite consensus disorder prediction 335 356 - -
Mtr5g2072 779 Gene3D - 694 757 - -
Mtr5g2072 779 SUPERFAMILY PH domain-like 72 197 - -
Mtr5g2072 779 MobiDBLite consensus disorder prediction 20 43 - -
Mtr5g2072 779 MobiDBLite consensus disorder prediction 14 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2072 Mtr-Chr5 26218434 26225290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2072 K20456 - gmx:100812036 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2072 5 26218434 26225290 Mtr5g2072 5 26218434 26225290 ECH