Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2068 ATGGCTTTGCATGTTCAAATGATTTTACCAATCTCATTGGTTCTTGCAATAATTTTATCAGGGCAAAGAACATGTGAGTCAGCTAGAGTATTCACCATAGTAAACTATTGCAAGGAGACTCTTTGGCCAGCTGTGTTTCCCGGGGAACACTTCAACGGCGGAGGATTCGTCCTTAAACAAGGACAATCCTCCGTGTTCACCGCTCCAGTAAGTTGGAGTGGCCGAATTTGGGCTCGAACTGGGTGCAACTTCGACCAAAATGGAGACGGACAATGCCAAACCGGTGCATGCGGCACCACTTTAAAATGTGGAGGGGCAGGAAAAACTCCAGCATCGCTCGCTGAATTCACACTCGCTCAACCCGATTTCTACGATGTTAGCCTCGTCGATGGCTTCAATGTGCCGATTTCTGTTAAGCCGATAAACGGAAAAGGAAATTGCTCAACTGCTGGTTGTGATTCTGACCTAAGATTAACTTGTCCCAAAGAACTTTCCGTTAGGTCTAACGGAAAGACCGTTGGGTGCCGAAGCGCTTGTGATGTGTTTAATACTGATGAGTATTGTTGTAGAGGAAATTTTGGGAACCCTTCTACTTGTAGACCAACATTTTATTCAAAGAAGTTTAAGGAGGCTTGTCCAACTTCTTATAGTTATGCTTATGATGATCCAACAAGTATTTTCACATGCACCGGAACGGATTACGTTGTTGCTTTCTGTGCTGACAGGAAGAAACAGATGTGCACTTACCATGATCACAAGCTTCATTGTAGTGGATCACAAGGCTTAAGGTCATTGATTGGAAGCTGGTGGATAGCAATGATAATGGTGTTTTTAGCTCTTAGCTTGTGA 849 0.4393 MALHVQMILPISLVLAIILSGQRTCESARVFTIVNYCKETLWPAVFPGEHFNGGGFVLKQGQSSVFTAPVSWSGRIWARTGCNFDQNGDGQCQTGACGTTLKCGGAGKTPASLAEFTLAQPDFYDVSLVDGFNVPISVKPINGKGNCSTAGCDSDLRLTCPKELSVRSNGKTVGCRSACDVFNTDEYCCRGNFGNPSTCRPTFYSKKFKEACPTSYSYAYDDPTSIFTCTGTDYVVAFCADRKKQMCTYHDHKLHCSGSQGLRSLIGSWWIAMIMVFLALSL* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2068 282 CDD TLP-PA 30 239 - -
Mtr5g2068 282 PIRSF PR5 1 281 IPR001938 -
Mtr5g2068 282 ProSiteProfiles Thaumatin family profile. 28 239 IPR001938 -
Mtr5g2068 282 Gene3D Thaumatin 30 239 IPR037176 -
Mtr5g2068 282 SMART tha2 31 240 IPR001938 -
Mtr5g2068 282 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 252 - -
Mtr5g2068 282 Pfam Thaumatin family 35 239 IPR001938 -
Mtr5g2068 282 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Mtr5g2068 282 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Mtr5g2068 282 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mtr5g2068 282 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Mtr5g2068 282 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Mtr5g2068 282 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Mtr5g2068 282 PANTHER OS03G0233200 PROTEIN 10 252 IPR001938 -
Mtr5g2068 282 SUPERFAMILY Osmotin, thaumatin-like protein 30 240 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2068 Mtr-Chr5 26163823 26165212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2068 28 246 Receptor kinase-like Gene Family AT5G38280 41.202 2.10e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2068 - - gmx:100813659 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2068 5 26163823 26165212 Mtr5g2068 5 26163823 26165212 ECH