Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2064 ATGAAAGCTACTACGGTTGAAGGATCTATGGTTGGTGGTGAAAGGTTTGATGATGTTGAAAAAGATAAGAAAAAGAAGCGCCGATCCAATCGTCGTAACAAGCAAAATCCTCCTTCATCAGTAAATGAAGCTATTGGCGTGTCTCCAGAATGCTCGGGGAAAAATGGAACACCTGTTCAACCATCTGGATCTGTTAGCAATTCATTGGCACCGAGTGATGACCCGATTTCGATCCCTCTTATACCATATAATGGTCCGGTGGCACCTGCTGATATGCAGAAAATGCTATTACATTTAAGAACACTGGTTTTACAAAATTCGCCAGAGCCCGTTGGTTGCTTGGAGTCATCAGGAACTAATGAAAAGAAAGACTCTGCTCGTTACAGTAAATTCGGTCTTTCTGGCCAAAGAAATTATTTTAGTCCACATTGGTCCGTTGAAGTGGTTGAGAAGGCATTGGAGAGGGGGGATGTTTTCAAAGCTACCTTTCGCGTGAATGCTCACAACAGAACTGAGGCCTACTGCAGCATTGATGGAGTACCAACGGATATTCTCATTGTTGGGGCTCCAGCCCAGAATAGAGCTGTGGAAGGCGATATTGTTGCAATTAAGATTGATCCTTTGCCATTGTGGACAAAAATGAAAGGACCAAATGTGGCTAACAACAATACTGCAGTACTAGAAGGTTGTAACCTTCTCGTGGAAGACAATATAGCGGGAGATAACAACTGTGAAGGAATAGAAAAGGTAGATGCTGACCACGAGTATTCTGGTCAAAACAAGGAAGAATCTTTTGACAACTCCTCCCCTTATAGAAGTTATCCATTTCCTGAAAAAAGATACATTTATGAGAATAATACTACACAGGGTTCACCTAACCATTTAAGTTTAATTGGACTAACCGGCCGTGATAACAATGATGGACCTAACTGTGATTCACCTGCTTCCATAAAGATTAATTCTGGTAGTGGACAGAGTGAAGTTATGAATGCAGTAGAGAAGATCTGTTTGTTGGTTAATTCTTTCCCTTCCAAAAGACCAACTGGCAGGGTGGTTGCTGTTATTGAGAGGTCTCCACGCCGAGAGTGTATAGTTGGTCATCTTAATGTGAAGCAATGGGTTTTTTCCCAGGAAATAAACAAGAAAGATCCAAGGAAGAATAAGAATTCAGTTTCTGAGCATGAATATATCCAACTGACACCAATTGATCCAAAGTTTCCTAACATAATGCTTCTTGTTAGAGATTTACCAAAGAGCATTAAGATAAGGCTGAAAAACGGTGATGCTGCAATTGAGAAGGATCTGGTAGCTGCACAAATTGTTGATTGGTTTGAAGAAAGTCCTTTTCCCGAGGGCGATATTTTGCAACACTTTGGGCGAGGCAGTGAAATTCAGCCGAACCTAGATTCTATTTTGTTTAAGAATGCAATCTGTTTGTCTGAATTTTCAGCTGAAGCTCTGTCCTGCCTGCCGCATGCTACTTGGGAGTTACCATTGAAGGAATTGCAAAGTCGAACTGACCTTAGAAATTTGTGCATTTTTTCTATTGATCCTTCAACTGCAACTGATTTGGATGATGCACTGTCAATTGAGAAGCTGCCTAATGGAAATTATAGAGTAGGCATCCATATTGCTGATGTATCATACTTTGTTCTACCGGACACAGCTTTAGATGTTGAAGCCCAGTTTAGGTCAACAAGTGTTTATCTGTTGCAAAAGAAGTTACCAATGTTGTCTGCATTAATCTCAGAAAATATTGGATCACTTAATCCTGGAGTGGATCGACTAGCATTTTCCATGCTTCTGGATTTAAATGTTGCTGGGGATGTTGTAGACCGTTGGATTGGTCGTACTGTTATTCAATCTTGCTGTAAGCTTTCATATGAACATGCACAAGACATAATTGATGGAGCTTTTAATTTTGAGAGTTCAAGCTTTCATGAAGATGGCTATCCTAAATTACATGGCCGTTTTGGTTGGCCTGATGTTATTACTTCTTTGAAGAGTCTCTATGAAATTTCAAATGTTTTGAAACACAAGAGATTTGCTGGAGGGGCTCTACGGCTTGATAAGCCCAAAATTGTTATCCTGTCTGATGAGAATGGCATCCCTTATAATAGTACATTTTCTGAACAAAAAGAATCAAACCTTCTTATTGAGGAGTATATGCTTTTGGCCAATACAACAGCGGCTGAAATTATTTGTAGAGCATATCCTGATGTTGCACTATTGAGGAGACATCCTGAACCTAATATGCGGAAGCTGAGAGAGTTTACAGCTTTTTGTCAGAAGCATGGTTTAAATTTGGACACTTCTTCATCTGGTCATATCCGTTCGTCCTTAGAGCAGATGAAGGAAAAGCTCAAGGATGACCCTGTGCTTTATGATATACTTATTTCCTATGCTTCTAAACTAATGCAGTCGGCGTCTTACTTCTGTAGTAGTGATTTAAAGGATAATGAACATGAATGGGGTCATTATGCACTGGCTGTCCCTTTATACACTCATTTTACATCACCTTTACGTCGGTATGCAGATATTGTTGTTCATCGGACACTACTAGCTACGATAGAAGCTGAGGAAATATATTTGAAGCAGGTTGGAAAGAAAATGGGAGTGGAAAAAAGATGTTTCACAGGCATCAACTTTGATAAAAAAACTGCAGAATCTGTTGAATGTAGGGAGGCTTTAATGGCTGCAGCTTTGAAGCATAGGGTTCCAAGTGCTGAAATACTTGCAGATATTGCTGCTCATTGCAATGATAGAAAGCTAGCTAGTAAATATGTTAAGGATTCCTGTGAGAGACTTTACATGTGGTTTCTCCTGAAGCAGCAGAAGGTCATATTATCAGAAGCAAGAGTATTAGGACTTGGCCCGAAGTTCATGTCAATATATATTCAAAAGCTAGCTGTTGAGAAACGCATATATTATGATGAAGTTGAAGGTTTGACTGCAGAGTGGCTTGATGCAACATCCACATTGGTGCTTAGCATGTCTCCTAATAAGCGTGCAAATCGGAGGGGAAACTGGAGGGCATTGTCAGAATCTGTGATGCTAGCTTGTCCATATGACCTGAAAGTTACAATGGATAATTCTAATCAAAATGATGCAATTGAAGTGGATGCTGCTGTATCTGATACGGACAAACATCATGATTCAACATCTGAAACTTCAGAGACTGAAATTGAGCCTTCATTTTTTCCACTCACTGTGCATCTTCTTTCAACCATTCCAGTAGCACTTCATGCTGTTGGTGGTGATGACGGGCCTCTTGATTTTGGAGTGAGGTTGTACATGACCTCTTATTTTGGGTAA 3315 0.4012 MKATTVEGSMVGGERFDDVEKDKKKKRRSNRRNKQNPPSSVNEAIGVSPECSGKNGTPVQPSGSVSNSLAPSDDPISIPLIPYNGPVAPADMQKMLLHLRTLVLQNSPEPVGCLESSGTNEKKDSARYSKFGLSGQRNYFSPHWSVEVVEKALERGDVFKATFRVNAHNRTEAYCSIDGVPTDILIVGAPAQNRAVEGDIVAIKIDPLPLWTKMKGPNVANNNTAVLEGCNLLVEDNIAGDNNCEGIEKVDADHEYSGQNKEESFDNSSPYRSYPFPEKRYIYENNTTQGSPNHLSLIGLTGRDNNDGPNCDSPASIKINSGSGQSEVMNAVEKICLLVNSFPSKRPTGRVVAVIERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVSEHEYIQLTPIDPKFPNIMLLVRDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPEGDILQHFGRGSEIQPNLDSILFKNAICLSEFSAEALSCLPHATWELPLKELQSRTDLRNLCIFSIDPSTATDLDDALSIEKLPNGNYRVGIHIADVSYFVLPDTALDVEAQFRSTSVYLLQKKLPMLSALISENIGSLNPGVDRLAFSMLLDLNVAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDGAFNFESSSFHEDGYPKLHGRFGWPDVITSLKSLYEISNVLKHKRFAGGALRLDKPKIVILSDENGIPYNSTFSEQKESNLLIEEYMLLANTTAAEIICRAYPDVALLRRHPEPNMRKLREFTAFCQKHGLNLDTSSSGHIRSSLEQMKEKLKDDPVLYDILISYASKLMQSASYFCSSDLKDNEHEWGHYALAVPLYTHFTSPLRRYADIVVHRTLLATIEAEEIYLKQVGKKMGVEKRCFTGINFDKKTAESVECREALMAAALKHRVPSAEILADIAAHCNDRKLASKYVKDSCERLYMWFLLKQQKVILSEARVLGLGPKFMSIYIQKLAVEKRIYYDEVEGLTAEWLDATSTLVLSMSPNKRANRRGNWRALSESVMLACPYDLKVTMDNSNQNDAIEVDAAVSDTDKHHDSTSETSETEIEPSFFPLTVHLLSTIPVALHAVGGDDGPLDFGVRLYMTSYFG* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2064 1104 PANTHER RIBONUCLEASE 43 1102 - -
Mtr5g2064 1104 SUPERFAMILY Nucleic acid-binding proteins 348 477 IPR012340 -
Mtr5g2064 1104 SMART RNB_2 505 859 IPR001900 GO:0003723|GO:0004540
Mtr5g2064 1104 Gene3D - 133 229 - -
Mtr5g2064 1104 SUPERFAMILY Nucleic acid-binding proteins 138 357 IPR012340 -
Mtr5g2064 1104 Gene3D - 380 463 - -
Mtr5g2064 1104 PANTHER DIS3-LIKE EXONUCLEASE 2 43 1102 - -
Mtr5g2064 1104 MobiDBLite consensus disorder prediction 53 71 - -
Mtr5g2064 1104 Pfam Dis3-like cold-shock domain 2 (CSD2) 396 475 IPR041505 -
Mtr5g2064 1104 Hamap DIS3-like exonuclease 2 [DIS3L2]. 24 1079 IPR028591 GO:0000175|GO:0034427
Mtr5g2064 1104 SUPERFAMILY Nucleic acid-binding proteins 466 944 IPR012340 -
Mtr5g2064 1104 ProSitePatterns Ribonuclease II family signature. 826 850 IPR022966 -
Mtr5g2064 1104 MobiDBLite consensus disorder prediction 1 71 - -
Mtr5g2064 1104 Pfam RNB domain 505 857 IPR001900 GO:0003723|GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2064 Mtr-Chr5 26113930 26120549 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2064 K18758 - gmx:100817387 1495.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2064 5 26113930 26120549 Mtr5g2064 5 26113930 26120549 ECH