Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2057 ATGGCGACAACAAGACAACTACACTCTATTCTCTCACTAACACTTCTCACTCTCCTTCTCTCCACAACAACCCACTCAGAACACGAAAACGACACTCCAATCAGTCGTTTCCAACGCTACCTTCGCATAAACACCGCACACCCAACCCCAGACTACACCTCCGCCATCTCCTACCTCATCTCCCAATCCAACTCCATCCCTTCCATCTATCATAAAACCTTTGAATTCTCACCAGGGAAGCCTCTCCTTCTCTTTACATGGCCTGGGTCCCACCCTTCTCTCCCTTCCATCCTCCTCAATTCCCATCTCGACTCCGTCCCTGCTGAACCCTCTAAATGGCTCCATCCTCCCTTCTCGGCCGTTCGCGACGCGGACGGCCTTATCTTCGCCCGTGGTGCACAGGATGATAAATGCATCGCTATGCAATACCTAGAAGCTATACGGAGTCTTAACAGCAAGGGTTTTGTTCCGGTTCGGACGGTTCATATCTCGTTAGTTCCTGATGAGGAAGTTGGTGGATTTGGCGGTTGGGCGATGTTTGTGGAGTCTGATGAATTTGAAAAGATGAATGTTGGATTTGCGTTAGATGAAGGACAAGCTTCGGTTGGTGATGAGTTTAGGGTTTTTTATGCGGATAGGATTCCGTGGAATTTGAAGATTAAGGCTACGGGGCAACCGGGGCATGGTTCGAGATTGTATGATGATAGTGCTATGGAGAATTTGATGAAGAGTGTTGAGGTTGTGAGTAGGTTTAGGGAGAGTCAGTTTGATGTTGTTAAGGCTGGGAAGGCGTTGAATTCGGAGGTTGTTTCGGTTAATCCTGTTTATGTTAAAGCTGGAGTTCCCACTCATGATGGGTTTGTGATGAATGTGCAACCTTCGGAGGCGGAGGCTGGTTTTGATCTTAGGTTGACTCCTACGACAGATCCTGATGAAATGAAGAGGAGAATTGCTGCTGAATGGGCACCCTCTGTTAGAAATATGTCATTTGAGATCATAGAGAAAGGACCACTCAGAGACTGTTTGGGGCATCCTTTAATGACTGCAACTAATGATTCCAATCCATGGTGGTTAGTTTTCAAGCAGGCTATAGCCTCAGCTGGAGAAAAACTTTCGAGGCCTGAAATTCTTGCATCCACAACTGATGCTCGATATATTCGACAGAAAGGGATTCCTGTACTTGGTTTCTCCCCAATGAAAAATACTCCCATCTTGCTTCATGATCACAATGAGCATCTACGCGATACCGTGTACATGAAGGGAATACAGGTATACGAATCTTTGATAAGCTCCTTGAGTTCGTTCCTGGAAGCTTCACATTAA 1323 0.4641 MATTRQLHSILSLTLLTLLLSTTTHSEHENDTPISRFQRYLRINTAHPTPDYTSAISYLISQSNSIPSIYHKTFEFSPGKPLLLFTWPGSHPSLPSILLNSHLDSVPAEPSKWLHPPFSAVRDADGLIFARGAQDDKCIAMQYLEAIRSLNSKGFVPVRTVHISLVPDEEVGGFGGWAMFVESDEFEKMNVGFALDEGQASVGDEFRVFYADRIPWNLKIKATGQPGHGSRLYDDSAMENLMKSVEVVSRFRESQFDVVKAGKALNSEVVSVNPVYVKAGVPTHDGFVMNVQPSEAEAGFDLRLTPTTDPDEMKRRIAAEWAPSVRNMSFEIIEKGPLRDCLGHPLMTATNDSNPWWLVFKQAIASAGEKLSRPEILASTTDARYIRQKGIPVLGFSPMKNTPILLHDHNEHLRDTVYMKGIQVYESLISSLSSFLEASH* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2057 440 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 133 172 IPR001261 -
Mtr5g2057 440 Pfam Peptidase dimerisation domain 217 319 IPR011650 -
Mtr5g2057 440 Pfam Peptidase family M20/M25/M40 98 430 IPR002933 GO:0016787
Mtr5g2057 440 PANTHER AMINOACYLASE-1 17 438 - -
Mtr5g2057 440 Gene3D Zn peptidases 23 217 - -
Mtr5g2057 440 SUPERFAMILY Zn-dependent exopeptidases 24 433 - -
Mtr5g2057 440 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 24 435 IPR010159 GO:0004046|GO:0005737|GO:0006520
Mtr5g2057 440 Gene3D - 218 329 - -
Mtr5g2057 440 Gene3D - 354 435 - -
Mtr5g2057 440 PIRSF ACY-1 23 437 - -
Mtr5g2057 440 SUPERFAMILY Bacterial exopeptidase dimerisation domain 217 323 IPR036264 -
Mtr5g2057 440 PANTHER PUTATIVE-RELATED 17 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2057 Mtr-Chr5 25949828 25957830 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2057 K14677 - gmx:100817383 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2057 5 25949828 25957830 Mtr5g2057 5 25949828 25957830 ECH