Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2053 ATGAAGTTAAGAGATCGAAGTGGAATCACTATGCTGCTAGTATTGTTATTGTGCTTAACAACTCTCTTTCTAAAAACAGAAGCTATATGGTTGACTATTCCAAGTTCAGGTACTAAATGTGTGTCTGAGGATATTCAAACACATGTCGTTGTTTTAGCTGATTACTATGTTGTTGCTGATGAAGGTCTTCACACTATTTCCGCAAAGGTAACATCTCCTTTTGGAAACAACGTTCACCACAATGAAAACGTTACACAAGGACAGTTTGCATTTACAACTACCGAGAGTGGAAATTATGTGGCGTGCTTTTGGATGGATGGAAAACACCCAGAAGGTAGTGTAAGTGTCAGCCTTGATTGGAAAACTGGAATTTCGGCCAAGGATTGGGATTCTGTTGCAAAGAAAGAAAAGATTGAGGGTGTTGAACTAGAAATCAGGAAGCTCGAAGGAATAGTGGATGCCATCCACGATTATCTAATTTATTTGAAGGAAAAGGAAGCAACGATGAGGGAAGTGAGTGAGAAAACAAATGCTCGAGTTGCGTGGTTTAGTATCATGTCCCTTGGTCTCTGCATTTTAGTTTCTGGATTGCAACTTTGGTATCTACAGTGCTACTTTCGAAAGAAGAAGCTCATATAG 639 0.3944 MKLRDRSGITMLLVLLLCLTTLFLKTEAIWLTIPSSGTKCVSEDIQTHVVVLADYYVVADEGLHTISAKVTSPFGNNVHHNENVTQGQFAFTTTESGNYVACFWMDGKHPEGSVSVSLDWKTGISAKDWDSVAKKEKIEGVELEIRKLEGIVDAIHDYLIYLKEKEATMREVSEKTNARVAWFSIMSLGLCILVSGLQLWYLQCYFRKKKLI* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2053 212 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 9 212 - -
Mtr5g2053 212 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 9 212 IPR015720 -
Mtr5g2053 212 SMART EMP24_GP25L_2 28 207 IPR009038 -
Mtr5g2053 212 Pfam emp24/gp25L/p24 family/GOLD 30 207 IPR009038 -
Mtr5g2053 212 ProSiteProfiles GOLD domain profile. 38 147 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2053 Mtr-Chr5 25822244 25826782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2053 K20352 - gmx:100820037 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2053 5 25822244 25826782 Mtr5g2053 5 25822244 25826782 ECH