Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1877 ATGGCTCCTGTGCTTAGCAGAAGCTTAGCTGCCACTGCCTCCCTCACTTCCCTCCCTTCTTCCTCCTCCTTTTCACTCTCCAGACCTTCTTCCACCCTCAGAAGCGCTTTTCTCCCACCGCAACCTCGCAGAAATCGCTTTTCTTCCACCGGTTTGAAGTGTAAACACCATGACAGAAGACGAACCGGCAGACTTTCTGTCCGTTGTGAGGCTGCTGTTGCGGAGAAAGAAGAGGCCAGTGGCGAGAAGTTTGAGTATCAAGCCGAGGTAAGCCGATTGATGGATTTGATTGTTCACAGTCTGTATAGTCACAAGGAAGTTTTTCTCAGAGAACTTGTGAGTAATGCTAGTGATGCTTTGGACAAATTGAGGTTTTTAAGTGTGACGGAGCCTTCTTTGCTTGGAGAGTCTGGAGAACTAGAGATTCGCATCAAGCCCGATCCAGACAATGGAACTATTACTATAACCGATTCTGGTATTGGAATGACCAAAGAAGAGCTCATTGATTGTCTTGGAACTATTGCTCAGAGTGGTACCTCAAAGTTTCTGAAGGCACTTAAGGAAAACAAGGATTTAGGAGCAGATAATGGTTTGATTGGTCAATTTGGTGTTGGATTCTACTCTGCATTTCTTGTTGCTGACAGGGTTGTTGTTTCTACAAAGAGCCCTAGATCAGATAAGCAATATGTATGGGAAGCTTTAGCTGATAGCAGCTCTTATGTGATAAGGGAAGAAACTGATCCTGAAAAGCTTCTACATCGTGGTACACAGATTACACTTCACTTGAGACCGGATGATAAGTATGAATTCTCAGAGCCAACCAAAATTCAGGGTTTGGTGAAGAACTACTCACAGTTTGTGTCCTTCCCCATCTTTACATGGCAAGAAAAATCTAGAACTGTTGAGGTGGAAGAGGAAGAAGAACCTAAAGAAGGGGAAGAACCGAAAGCAGAGGGCGATACTAACAAGACAAAAAAGACTAAAACTGAGAAGTATTGGGACTGGGAACTAGCCAACGAGACAAAGCCAATATGGATGCGGAATTCAAAGGATACTCCAAGGGAAGAGTACAATGAGTTTTACAAAAAGACTTTTAGTGAATTCTTGGAACCAGTTGCTTATACCCACTTTACTACTGAGGGTGAGGTTGAGTTCAGAAGCATTCTATATATTCCAAGTATGGGACCTCTCAACAATGAAGAAGTAGTGAACCCTAAAACAAAGAACATACGCCTGTATGTAAAGCGTGTGTTCATCTCAGATGATTTTGATGGTGAACTGTTTCCACGTTACTTGAGCTTTGTGAAGGGTGTGGTTGATTCGAATGACCTTCCTCTGAATGTTTCTCGGGAGATCCTTCAAGAAAGCAGAATTGTAAGGATAATGAGAAAGAGACTTGTCAGGAAGACATTTGATATGATTCAAGATCTTGCTGAAGGTGAAAATAAGGAGGATTACAAGAAATTCTGGGAGAACTTTGGTAGGTTTATTAAGTTGGGATGCATTGAGGACAGTGGAAATCATAAGCGCATAACACCACTGTTAAGATTTTACACTTCCAAAAGTGAGGAGGAACTTAAAAGCCTAGATGAGTATGTTGAAAACATGGGTGAAAATCAAAATGCCATCTATTACCTAGCAACTGACAGCTTGAAAAGTGCAAAGACTGCTCCATTTTTAGAGAAGTTGGTTCAGAAAGATATTGAGGTTCTTTATTTGGTTGATCCTATAGACGAGGTTGCCATTCAGAACCTACAGACATACAAAGAAAAGAAATTTGTTGATATCAGCAAGGAAGATTTGGAATTAGGTGACGAGGATGAGGTCAAAGAGAGGGAAACCAAGCAAGAATACAATCTACTTTGTGATTGGATAAAACAACAGCTCGGTGATAATGTGGCTAAAGTTCAAGTCTCTAAGCGTTTGAGCTCATCTCCCTGTGTGCTTGTATCTGGAAAGTTTGGTTGGTCTGCAAATATGGAAAGATTAATGAAGGCACAGGCTCTTGGAGACCAGGCAAGTTTGGAGTTTATGAGAGGGAGGAGAATATTGGAGATTAATCCAGATCATCCCATCATCAAAGATTTAAGTGCTGCCTGCAAGAATGCTCCCGACAGCAGTGAAGCAAAGAGAGCTGTTGAGCTCTTATACGATACAGCACAAATTTCTAGTGGATTTTCTCCTGAGAGCCCTGCTGAGTTAGGAAATAAGATTTATGGAATGATGGCGTTGGCCTTGGGAGGAAGATGGGGTAGAACCGAAGAAGAGGGAGATGCACCAGCAGAGGCTGATTCAAATGAAAGTGAAAGTACAGAGGCTGAAGTTTTTGAACCTTCTGAAGTCATAGCAGAAAATGATCCTTGGACAACAGATTAG 2376 0.42 MAPVLSRSLAATASLTSLPSSSSFSLSRPSSTLRSAFLPPQPRRNRFSSTGLKCKHHDRRRTGRLSVRCEAAVAEKEEASGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGESGELEIRIKPDPDNGTITITDSGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVADRVVVSTKSPRSDKQYVWEALADSSSYVIREETDPEKLLHRGTQITLHLRPDDKYEFSEPTKIQGLVKNYSQFVSFPIFTWQEKSRTVEVEEEEEPKEGEEPKAEGDTNKTKKTKTEKYWDWELANETKPIWMRNSKDTPREEYNEFYKKTFSEFLEPVAYTHFTTEGEVEFRSILYIPSMGPLNNEEVVNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDLAEGENKEDYKKFWENFGRFIKLGCIEDSGNHKRITPLLRFYTSKSEEELKSLDEYVENMGENQNAIYYLATDSLKSAKTAPFLEKLVQKDIEVLYLVDPIDEVAIQNLQTYKEKKFVDISKEDLELGDEDEVKERETKQEYNLLCDWIKQQLGDNVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDQASLEFMRGRRILEINPDHPIIKDLSAACKNAPDSSEAKRAVELLYDTAQISSGFSPESPAELGNKIYGMMALALGGRWGRTEEEGDAPAEADSNESESTEAEVFEPSEVIAENDPWTTD* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1877 791 PANTHER HEAT SHOCK PROTEIN 90-5, CHLOROPLASTIC 24 782 - -
Mtr5g1877 791 SMART HKATPase_4 104 266 IPR003594 -
Mtr5g1877 791 MobiDBLite consensus disorder prediction 300 325 - -
Mtr5g1877 791 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 24 782 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Mtr5g1877 791 MobiDBLite consensus disorder prediction 35 55 - -
Mtr5g1877 791 Gene3D - 599 746 IPR037196 -
Mtr5g1877 791 SUPERFAMILY HSP90 C-terminal domain 621 742 IPR037196 -
Mtr5g1877 791 MobiDBLite consensus disorder prediction 752 791 - -
Mtr5g1877 791 Gene3D - 70 312 IPR036890 -
Mtr5g1877 791 CDD HATPase_Hsp90-like 91 287 - -
Mtr5g1877 791 MobiDBLite consensus disorder prediction 760 774 - -
Mtr5g1877 791 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 105 264 IPR003594 -
Mtr5g1877 791 SUPERFAMILY Ribosomal protein S5 domain 2-like 341 599 IPR020568 -
Mtr5g1877 791 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 82 297 IPR036890 -
Mtr5g1877 791 Pfam Hsp90 protein 269 770 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Mtr5g1877 791 PIRSF HSP90_HTPG 49 784 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Mtr5g1877 791 Gene3D - 339 511 - -
Mtr5g1877 791 PRINTS 90kDa heat shock protein signature 82 102 IPR020575 -
Mtr5g1877 791 PRINTS 90kDa heat shock protein signature 103 125 IPR020575 -
Mtr5g1877 791 PRINTS 90kDa heat shock protein signature 152 169 IPR020575 -
Mtr5g1877 791 PRINTS 90kDa heat shock protein signature 170 187 IPR020575 -
Mtr5g1877 791 PRINTS 90kDa heat shock protein signature 199 221 IPR020575 -
Mtr5g1877 791 PRINTS 90kDa heat shock protein signature 254 271 IPR020575 -
Mtr5g1877 791 PRINTS 90kDa heat shock protein signature 273 291 IPR020575 -
Mtr5g1877 791 Hamap Chaperone protein HtpG [htpG]. 74 743 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Mtr5g1877 791 Gene3D - 512 598 - -
Mtr5g1877 791 ProSitePatterns Heat shock hsp90 proteins family signature. 102 111 IPR019805 GO:0005524|GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1877 Mtr-Chr5 21391051 21398350 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1877 K09487 - gmx:100819778 1302.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1877 5 21391051 21398350 Mtr5g1877 5 21391051 21398350 ECH