Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1870 ATGTCTCGAAAACTAGAGAGTCCAGTTCAGACCCAGATGGCAGTTGCAGTGATGAGGAGTCCTCTTGGGAGGGAGTATCATGGGAGTCAGAGTCAGAATCAAAGCCAGAGGCAACCTGCTGGGAGGAGACGCGTGTTCGTCCAAACCGATAAGGGTTGTGTGCTTGGTATGGAATTGGATCGCGGGGACAATGTACATACCGTTAAGAGGAGGTTGCAGCTTGCTCTTAATGTTCCTGTTGAAGAGAGTTCTCTTACTTTTGGTGATATGGTCTTGAAGAATGACCTTAGTGCTGTTCGGAATGATTCGCCTCTTTTATTGACGAGGAGTTTGCTTCATAGAAGCTCATCAACTCCTTGTTTGTCTCCAACTGGGAGGGATATCCAGCAAAGGGATAAGAGCGGTCCTATTGAGATATTGGGGCAATCCACACGCCTTGATGTAATGAAACTCATGGCTAAGGATATTGTGAAGGCGATTAAGATGGGGATCGATCCGGTTCCTGTTAATGGTGGGCTTGGAGGTGCGTATTATTTTAGGGATTGTAATGGGGATAGTGTTGCTATTGTGAAACCGACTGATGAGGAGCCTTTTGCGCCGAATAACCCTAAAGGTTTTGTTGGTAAAGCTCTTGGACAGCCGGGGTTGAAACGATCTGTTCGGGTTGGGGAGACGGGTTTTAGGGAGGTTGCGGCTTATCTTTTGGACTATGATCATTTTGCTAATGTGCCTCCTACTGCCTTGGTGAAGGTTACTCACTCGATCTTCAATGTCAATGATGAAGTCAATGGGAATTGTTTCCGGAGAAAGAGACTGGTTAGCAAGATTGCTTCTTGTCAGCAGTTCATACATCATGATTTTGATGCTAGTGATCATGGTACGTCGAGCTTCCCGGTTGCTTCGGTGCATCGTATAGGGATATTAGATATTAGGATTCTTAACACAGATAGACATGCTGGAAACTTGTTGGTTAGAAAAGTTGGTGATGGCATTGGAACTTTTGGTCAGGTGGAGCTAATTCCTATTGATCATGGGCTCTGTCTGCCAGAAACTTTGGAGGATCCTTATTTTGAGTGGATTCATTGGCCTCAAGCTTCCATTCCGTTTTCCGATGAGGAGCTTGCCTACATTCGTGATCTAGACCCTGCTCATGACTGCGAGATGCTTCGAATGGAGCTGCCAATGATTCGAGAGGCTTGTCTCAGAGTGCTGGTGCTCTGCACCATTTTTCTCAAAGAGGCTGCTGAATTTGGTCTTTGTCTTGCTGAAATTGGCGAGATGATGACTCGCGAGTTCCACAGGGGTGAGGAGGAGCCTAGTGAACTTGAGGTTGTTTGTTTAGAGGCAAAGAGGATGTTGGCAGAGAGGGAGGAACTATCTCCAAGGACTGAGGTGGGAGATGACGAGTTCTTCTTTGATATTGACTGTGATGAAGGTGGATCAGACTCCACTCCAAAGATGGCAATGGAGGATCCTTTAATCAGAGAAATTTTTCAGCATGCACCTGGAAATGGGCACATGCGCAGCCCACTTTCCAAATTGGATGAGAGCATTGAGGAGGAAGAGGATGAAAATGATGAAGAATCTCCTCAAGAATTTGGTACTTTTTCTGCTCAAGAAAAAGTTGCAACTATTCCGGAGATTACTGTATCACTGAAAAATACCATGTTAGCCGAAAAAAAGCAGAAACACTCTGGAGGAAAACTGGATAACGGTTACTTTACATCATCTGGCCATAGGAGTGCCAATGAGCAGCTTCCTGCAAGCATAAGCTTCGTAATGCTTGCAGATATGACCGAGGATGATTGGACATTGTTTCTTGAGAAGTTTCAAGAGTTGCTGTATCCGGCATTCGCCAAGAGGAAATCTATAACCTTAGGACAGAAGCAGAGGCAGAGGCTTGGTACTTCGTGCCAGTTTTGA 1923 0.4555 MSRKLESPVQTQMAVAVMRSPLGREYHGSQSQNQSQRQPAGRRRVFVQTDKGCVLGMELDRGDNVHTVKRRLQLALNVPVEESSLTFGDMVLKNDLSAVRNDSPLLLTRSLLHRSSSTPCLSPTGRDIQQRDKSGPIEILGQSTRLDVMKLMAKDIVKAIKMGIDPVPVNGGLGGAYYFRDCNGDSVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDYDHFANVPPTALVKVTHSIFNVNDEVNGNCFRRKRLVSKIASCQQFIHHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKVGDGIGTFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSDEELAYIRDLDPAHDCEMLRMELPMIREACLRVLVLCTIFLKEAAEFGLCLAEIGEMMTREFHRGEEEPSELEVVCLEAKRMLAEREELSPRTEVGDDEFFFDIDCDEGGSDSTPKMAMEDPLIREIFQHAPGNGHMRSPLSKLDESIEEEEDENDEESPQEFGTFSAQEKVATIPEITVSLKNTMLAEKKQKHSGGKLDNGYFTSSGHRSANEQLPASISFVMLADMTEDDWTLFLEKFQELLYPAFAKRKSITLGQKQRQRLGTSCQF* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1870 640 CDD Ubl_ubiquitin_like 45 95 - -
Mtr5g1870 640 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 5 640 IPR044571 -
Mtr5g1870 640 MobiDBLite consensus disorder prediction 501 535 - -
Mtr5g1870 640 SUPERFAMILY Ubiquitin-like 36 97 IPR029071 -
Mtr5g1870 640 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 163 461 IPR000403 -
Mtr5g1870 640 MobiDBLite consensus disorder prediction 516 530 - -
Mtr5g1870 640 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE 5 640 - -
Mtr5g1870 640 Pfam Phosphatidylinositol 3- and 4-kinase 174 424 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1870 Mtr-Chr5 21254890 21257909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1870 1 640 Acyl Lipid Metabolism Gene Families AT1G26270 68.217 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1870 - - aip:107643746 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1870 5 21254890 21257909 Mtr5g1870 5 21254890 21257909 ECH