Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1696 ATGAGGAAGAATGGATGGCAGTTACCTTACCACCCTCTTCAGGTGGTGGCTATTGCTGTTTTTTTAGCTCTTGGTTTTGCTTTCTATGTGTTCTTTGCTCCTTTTGTTGGGAAGAAGATTTATCAGTATATTGTTACTGGACTCTACACACCTTTGATTACTTGTGTCTTTGGACTGTACATATGGTGTGCAGCAGCTGATCCAGCAGATCCAGGGGTTTTTAAGTCCAAAAAGTATCTTAAAATTCCAGACAGCAAAAAGCTTAGTGGATTTAAAGATTCTAAACTAGGAGGGGGATCAAATTCATCAGTGAATGATGGAAATGCTTCAACTATTGGACCAAAATCTATGGATAAGGAAGCATTCGGAACTGAAGCAAGTTTAAAAGATGCTTCTATTTCAATAGAGAAGAAGAGTGCATCACCACCTTCACCATCCTGTTTTCTATGGCTTTTCTCTCCTTGTGCTTATATATGTAGCTGCGCTAGTTCGCATGAGCACTCTTCTGATCTACAAGCAAGTGAAGATGGCATGTTCTACTGTAGTTTGTGTGAAGTTGAGGTCTTCAAGTACAGCAAACACTGTAGAGTTTGTGACAAGTGTGTTGATCGCTTTGATCATCATTGCAGATGGCTTAATAACTGTATTGGGAAAAAGAACTATCGGAATTTTTTCACCCTTATGGTTGCTGCTCTTCTCTTGCTTATTCTTCAATGGTTGACTGGGATAGCTGTGCTTATCTGCTGTTTTCTCAAGAGGAAGGAATTTTCCGTGGACGTATCCTCCAAGTTGGGCAGCAGTTTCTCTCTGGTTCCTTTTGTTATTGTGGTGGCAGTATGCACAATTTTGGCTATGGTTGCTACCTTACCCCTTGTTCAGCTTTTTTTCTTTCATATTCTTCTCATTAAAAAGGGAATCAGCACATATGATTACATCATAGCTTTGAGGGAGCAGGATCAGCAAGGAGTTGGAGGTCAGCAGAGCCCCCAAATGTCGCCTGTTAGCTCAATTACTGGACTAAGCAGTGCAAGCTCCTTTTCTACTTTCCGTCGTGGTCAATGGTGCACACCCCCACGCATGTTCGTGGATGATCAGTTTGATGTAGTGCCGCCAGAAACAGCTTCCGTAAGTTCGCTCGGAAAGAAGACTATAAGAGAAGAACCAGTCAAAAAAAAGAATACAGGAGCAGTCAAAATTAGTCCTTGGACATTAGCGCGGTTAAATGCAGAAGAGGTTTCAAGAGCCGCTGCAGAAGCAAGAAAAAAATCGAAAATTCTGCAGCCTGTAGTGAGACACAACAACGAGCCATTCAGGCTAGAAGCTGATCATAACTCTGGAAGCAGTGGACGACGAATGGCCCCTAGGAGGCCAGGTAAACGGATTCGCTTGCCTGCTGACTTACCTATGGAAGCCTTAACAAACTATTCTTCTGGAAATATCGACAAAGGCTTCAATGGAATGTCTAGTTTAGCCTCTCTCCAGCTTGAAGCACGGAGAAGTCAAGTTGTGTCAAGCTCGGGCGGCATTGTTGCATCTTCTCCAGAAAGCAGTTTAGATTCACCTGATATCCACCCTTTTTGTGTGCCTCCGGCGGAAGGCGAATCCACAAGACGGGTTGCTGCAGGTCTTTCTGTTGCTGGTCCCGCGACTCTGAAAGAATTTCCGTTGTCGAGGTCAACTAGTGATGGGTATGATGCATCTGGTGGGGAAGACAGTGACAGGGTTCCTACTAGGATTGTGAATGTTCATAGATCAGCAACAAATTGGAGTAATCTTCTCTTCAATGCTGATCATGATGAGAGAGGTTATGAACCAAAATCATCATCTAGCCTTGCTCATAATAGAAAGTTGTGA 1854 0.4326 MRKNGWQLPYHPLQVVAIAVFLALGFAFYVFFAPFVGKKIYQYIVTGLYTPLITCVFGLYIWCAAADPADPGVFKSKKYLKIPDSKKLSGFKDSKLGGGSNSSVNDGNASTIGPKSMDKEAFGTEASLKDASISIEKKSASPPSPSCFLWLFSPCAYICSCASSHEHSSDLQASEDGMFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKKNYRNFFTLMVAALLLLILQWLTGIAVLICCFLKRKEFSVDVSSKLGSSFSLVPFVIVVAVCTILAMVATLPLVQLFFFHILLIKKGISTYDYIIALREQDQQGVGGQQSPQMSPVSSITGLSSASSFSTFRRGQWCTPPRMFVDDQFDVVPPETASVSSLGKKTIREEPVKKKNTGAVKISPWTLARLNAEEVSRAAAEARKKSKILQPVVRHNNEPFRLEADHNSGSSGRRMAPRRPGKRIRLPADLPMEALTNYSSGNIDKGFNGMSSLASLQLEARRSQVVSSSGGIVASSPESSLDSPDIHPFCVPPAEGESTRRVAAGLSVAGPATLKEFPLSRSTSDGYDASGGEDSDRVPTRIVNVHRSATNWSNLLFNADHDERGYEPKSSSSLAHNRKL* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1696 617 Pfam DHHC palmitoyltransferase 179 312 IPR001594 GO:0016409
Mtr5g1696 617 ProSiteProfiles DHHC domain profile. 179 229 - -
Mtr5g1696 617 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 520 - -
Mtr5g1696 617 MobiDBLite consensus disorder prediction 93 117 - -
Mtr5g1696 617 MobiDBLite consensus disorder prediction 596 617 - -
Mtr5g1696 617 MobiDBLite consensus disorder prediction 95 112 - -
Mtr5g1696 617 PANTHER S-ACYLTRANSFERASE 8 520 - -
Mtr5g1696 617 MobiDBLite consensus disorder prediction 554 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1696 Mtr-Chr5 18759550 18765841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1696 172 310 Lipid Metabolism Gene Families AT4G22750 28.859 2.67e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1696 K20027 - gmx:100803007 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1696 5 18759550 18765841 Mtr5g1696 5 18759550 18765841 ECH