Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1670 ATGTATTCTTCCAGAGGGAGTGGCAATTATGGCCAATCGTACACAGGTCAATCTGCATATGGCCAAAATTTGAGTGCTAATTATTCTGGAGCTTCTGCTGGAGGGCATGATGCTACCCAGCATTCCGCGGCTTCGAGACATTCGGGTATATTAGGTAGTTCTCAAGATGCAGCTGATGTTGGTAGTTATAGTAGGGCTCATGCTTCTGTTGCTCAGTATGGAGGGCAATATAGTTCTGTTTATGGTTCAGCTGCGTTGAGCACCGCACCGCAGGCTCCTTCTTTGACGGCCAAGGGAGCTGGTTCATCATCGGCTTTAGATGCTCGTGGAAGCTACTCTTTGGGTGTATCAGATTCACCCAAGTTTGCTTCTAGTGATTATTTGTCGTCCTCAACACATGTGTATGGCCACAAATCTGATCAATTGTATGGTGACAAGAGTTTGGATTATTCTGGACTAGATAGAAGGCAATATGGTGAACGGCAGAGTGGTTACACTGGTAGGGATTTAGCAAGTGATCCAGCTAGCCGCTATGCTACCGATGCTGGTGGATATAGTCATCAACATCAGGCAACTTTGCTAAGACAAGAGCAATTGCTGAAATCTCAGTCTCTTCAAGCTGCTGCTTCACTTGATGGGGCTACCAGACAAACTGATTATCTGGCAGCTAGGGCGGCTGCAAGTCGTCACCCAACCCAAGATCTCATGTCTTATGGAGGAAGGATTGATTCTGATCCTCATGCTTCATCAATGCTAAGTGCTACTTCATATAGTGGACAGCATGCACCATCAATATTAGGAGCAGCACCGAGGCGAAATGTGGATGATCTCTTGTATTCCCAGAATGCGTCAAATCCTGGTTATGGAGTGAGCCTCCCACCTGGTAGGGACTATGCCAGCGGAAAAGGTATTCATGGAAATGCTATGGATTTGGATTACCCGGGAAGTCTTTTGTCACATGATCGGAAGGATGATCGGGCTAGTTATCTTCGAGAATTTGAACTAAGGGAAGAAGAACGACGTCGAGACCGCTTGCGTGATAAAGATAGGGATAGAGAAAGGGACAAAGAACGAGAACGATTGCGAGAGCGGGAGCGGGAGCGAGATCGAGAAAAGGAACGTGAAAAGGAGCGCTTGGAGCGGCGTGAAAAGGAGAGGGAGCGAGAACGCAAACGAGCACTTGAAGTTAGGCTTGAACGAACTCCAGTGAGATCCTCCAAGGATCCTCGCAGCACTTCAAAGGATCCTCGCAGCACTTCAAAGGATCCTCGTGGGTCGTCTTTGACAAAGGAGGGGAAATCTTCACGACGGGACTCCCCACATCGTGGCGCTTTACATAGGCACCGTTCACCTGTTAAAGAAAAACGGAGAGAATATGTCTGCAAGGTTTATCCTTCTTGTTTGGTAAATATTGAGAGGGATTACCTCTCAATAGACAAGCGATACCCGCGACTCTTCATCTCTCCTGAATTCTCCAAGGCTGTTGTGAGCTGGCCGAAGGAAAACCTTAACCTCTCTTTACATACTCCTGTCAGTTTTGAGCATGATTTTGTTGAAGAAGAAAGTGCTAGAGACTCGTCCAGCAAGCTTTTGGTGGGACAACCTACAGGCACTGAACAAGGAAATACAGTTTGGAATGCCAAAGTAATTTTGATGAATGGGCTTAGTAGGGGTGCATTGGAGGAACTGTCAGCTGATAAACTTTTGGATGACCGCATTCCTCATGTTTGCAATATCCTTAGATTTGGAATCCTTAAGAAGGACCATTCTTTCATGGCAGTTGGTGGTCCATGGGGACCTGCTGATGGGGGTGATCCATCTAATGATGATAACTCTTTGATCAGAACAGCCCTTAGATACACAAAGGATATTATTCAGCTTGATTTGCAGAAGTGTCAACACTGGAACCGGTTCCTTGAGGTACATTATGATAGAATCGGTAAAGATGGTTTCTTTAGCCACAAGGAAATTACTGTACTTTATGTTCCTGATTTGTCTGACTGCCTCCCTTCATTGGATCAATGGCGGGATCAGTGGCTTGCCCACAAGAAAGCAGTGGCTGAAAAAGAACGTCAAATTGCATTAAAGAAAGAGAAAGCAAGGGCTATCAAGGAATCAAATGATAAATTAGGTAAGAAGGATTCTCCTGCATCTGGAAAGTCAAATGCTAAGAAAAAGGAGAAAGATAATACTGTTAAGGAAGGAAAGGAAAAAAAAGCTGGAGTGAGTATCAATACAATTGCTAAAAATGATGCCTCGGGGACAGTTGAAGCAAAGAGTGCAGAGAAAAAGCCAGGGGAAACTACCCCTGGTCAAACCACAGGAAGTGCAAAGTCTGTGAAAAAGAAAATTATAAAGAAGATTGTGAAAAAAGTTGTCAATAAGACAAACGATAGTGCCAAGAGAGAAACTGACAAACCAGGTGAGAAGGATGTTGCAGATAAAGTGGCCACGTCAGAGGTTCCTGTTGATGAGGTCAAGTCTTCTGTGGATCCTACTGGGGTTCAAACTTCTGGGAAGGACATAGTTGCAGAGGATATTCCTATTGGGAAAGCTGATGGTGAAGGGAAAAATGGTAAGGAAATAAACAGTATTGAAGATAATACAGGCACCAATGATGCTACCGTGAAAACAATAAAAACAAGGAAAATTATCAAGCGGGTACCTAAAAAGAAGGTGGTTGGCGAGGCATCTAAATTTGTAGTAAACGAAGGGAATGTTGTGGCATCTCAGGCACAGGCTGGTGCCGACAGCACTGACAAGCAGACTGCTGAAGCAGACACCATAGAGACTGAGGGCAAGAAACCTGCAAAGGTAGTAACCAAGAGAAAGTTGAAAACACCTACCTCTGGGGTGCAAGATGATGCAACTGTAGTAAATGAAGGGAATACTGTGGCTGTTCAGGCACAGGATGGTACCGACAGCCCTGGCAAGCAGACTGCCGATGGAGACACAACAGTGACCGAGGGCAAGAAACCTGCAAAGGTAGTAACCAAGAGAAATTTAAAAACACCAACCTCTGGGGTGCAAGATGATGCAACTGGTTCCAATAAAAAAGTCGCAAAGAGCACTGATAAAACTGATGACGAAAATGCTGTTGCAGCTCCTGCAAATGATGACACTCAGAGCACTGACAAGCAGGCTGCTAATGCAGATACAAAAATTGTTTCGGTAGCAAAGAAAATTGTGAAGGTAGTTCCTAGGAAAAAGTTAAAGGTGTCTACCTCTGAAAAGCAAGAAGGTGCACGTGGTGCAGGTGATTCCAATAAAAATGAAATGAAGTCTGACAACAATGACAAGAAGGATGGAAAAGGAACTGGAGAAAAAAGTGGATCCAAGATAGATAAGAAGAAAACCTCTGAGAAAGATACTCAAATTGTCACGGGGAAACTGAAAGTTGGGGAAAAATCGAAAGATGAGAAAGTAACAAAAGAGAAAGATGGAAAAGATGAGCCGAAAAGCAAATCTAGTAAAGAAGTGAAAGAGAAGAAGAAGTCCGATGAACCTCCTCGGCACCCTGGATTTATTCTTCAAACAAAATCAACAAAAGATTCTAAACTACGGTCATTGTCACTGTCTCTGGATTCATTGTTGGATTATACTGACAAAGATGTTGATGAATCAACACTTGAGCTTTCATTATTTGCTGAATCATTTTATGAAATGCTTCAGTTTCAAATGGGCAGTAGGATTTTGACTTTTCTTCAGAAATTGCGCGAAAAATTTGTGATGAAAAGAGCTCAGCGAAAGAGGCAGCGAGAAGATGGACTTGACAAGGATAGTGCAAACAAGTCACCTGCTAAACGTAAAAAAGGTGATGATCCGTCTGTTAAGAGTGAAACTGATGTGGATGCATCAAATCCAACCCAAGCAGATAACAAGAAAACTGTTGCCGAGATTGAGAATTCTGGTAACAAGGAGGATGACGATGTGAAGATGGAAAATGCATCAGATGATGAAGATCCGGAAGAAGAGGATCCTGAAGAGGAACCAGAAGAGGAACCAGAAGAGGAAATGGAAAATGGTACTCCCCAACATGACTCATCCAATGGTAAAAATGCTGAACACGTCGATGCAAATAATGAATCTGAAAATGCTACCAGCAACGAAAAAGCAGCAGATGAAACTTCTAAAGGGGAAATAAAGGTTAAAGAAGAGGTGCAAGAATTAAAGGATGATATTCAGCTCAAGGAAGCAAAGGAAAGCAAGGTTGATACCGTTAAGAAAGAAACCCGTGCTGTTAAGGAGGCTGTTGTAAACAAAGAATTGTTGAAGGCTTTTCGATTTTTTGATCGGAATCGTGTTGGCTACATTAGGGTTGAAGATATGAGAATAATAATCCACAATCTGGGGATGTTCCTTTCACACAGGGATGTGAAGGAGCTTGTACAGAGTGCATTGTTGGAGAGCAACACCGGGAGGGACGATCGGATACTTTATATCAAGTTGGTGCGGATGGCTGACATTTGA 4470 0.4349 MYSSRGSGNYGQSYTGQSAYGQNLSANYSGASAGGHDATQHSAASRHSGILGSSQDAADVGSYSRAHASVAQYGGQYSSVYGSAALSTAPQAPSLTAKGAGSSSALDARGSYSLGVSDSPKFASSDYLSSSTHVYGHKSDQLYGDKSLDYSGLDRRQYGERQSGYTGRDLASDPASRYATDAGGYSHQHQATLLRQEQLLKSQSLQAAASLDGATRQTDYLAARAAASRHPTQDLMSYGGRIDSDPHASSMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYASGKGIHGNAMDLDYPGSLLSHDRKDDRASYLREFELREEERRRDRLRDKDRDRERDKERERLRERERERDREKEREKERLERREKERERERKRALEVRLERTPVRSSKDPRSTSKDPRSTSKDPRGSSLTKEGKSSRRDSPHRGALHRHRSPVKEKRREYVCKVYPSCLVNIERDYLSIDKRYPRLFISPEFSKAVVSWPKENLNLSLHTPVSFEHDFVEEESARDSSSKLLVGQPTGTEQGNTVWNAKVILMNGLSRGALEELSADKLLDDRIPHVCNILRFGILKKDHSFMAVGGPWGPADGGDPSNDDNSLIRTALRYTKDIIQLDLQKCQHWNRFLEVHYDRIGKDGFFSHKEITVLYVPDLSDCLPSLDQWRDQWLAHKKAVAEKERQIALKKEKARAIKESNDKLGKKDSPASGKSNAKKKEKDNTVKEGKEKKAGVSINTIAKNDASGTVEAKSAEKKPGETTPGQTTGSAKSVKKKIIKKIVKKVVNKTNDSAKRETDKPGEKDVADKVATSEVPVDEVKSSVDPTGVQTSGKDIVAEDIPIGKADGEGKNGKEINSIEDNTGTNDATVKTIKTRKIIKRVPKKKVVGEASKFVVNEGNVVASQAQAGADSTDKQTAEADTIETEGKKPAKVVTKRKLKTPTSGVQDDATVVNEGNTVAVQAQDGTDSPGKQTADGDTTVTEGKKPAKVVTKRNLKTPTSGVQDDATGSNKKVAKSTDKTDDENAVAAPANDDTQSTDKQAANADTKIVSVAKKIVKVVPRKKLKVSTSEKQEGARGAGDSNKNEMKSDNNDKKDGKGTGEKSGSKIDKKKTSEKDTQIVTGKLKVGEKSKDEKVTKEKDGKDEPKSKSSKEVKEKKKSDEPPRHPGFILQTKSTKDSKLRSLSLSLDSLLDYTDKDVDESTLELSLFAESFYEMLQFQMGSRILTFLQKLREKFVMKRAQRKRQREDGLDKDSANKSPAKRKKGDDPSVKSETDVDASNPTQADNKKTVAEIENSGNKEDDDVKMENASDDEDPEEEDPEEEPEEEPEEEMENGTPQHDSSNGKNAEHVDANNESENATSNEKAADETSKGEIKVKEEVQELKDDIQLKEAKESKVDTVKKETRAVKEAVVNKELLKAFRFFDRNRVGYIRVEDMRIIIHNLGMFLSHRDVKELVQSALLESNTGRDDRILYIKLVRMADI* 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 923 938 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 704 740 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 1245 1280 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 1313 1340 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 794 821 - -
Mtr5g1670 1489 ProSiteProfiles EF-hand calcium-binding domain profile. 1418 1453 IPR002048 GO:0005509
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 794 871 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 30 56 - -
Mtr5g1670 1489 Pfam DBC1 575 692 IPR025954 -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 1245 1380 - -
Mtr5g1670 1489 PANTHER CCAR1 HOMOLOG 1017 1488 - -
Mtr5g1670 1489 PANTHER CCAR1 HOMOLOG 1 804 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 338 452 - -
Mtr5g1670 1489 SUPERFAMILY EF-hand 1421 1466 IPR011992 -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 155 182 - -
Mtr5g1670 1489 Coils Coil 1235 1255 - -
Mtr5g1670 1489 Gene3D - 1420 1485 - -
Mtr5g1670 1489 Coils Coil 1380 1400 - -
Mtr5g1670 1489 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1017 1488 IPR025224 GO:0006355
Mtr5g1670 1489 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1 804 IPR025224 GO:0006355
Mtr5g1670 1489 Pfam BURAN domain 472 554 IPR045354 -
Mtr5g1670 1489 Pfam LAIKA domain 1170 1235 IPR045353 -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 1036 1051 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 1000 1017 - -
Mtr5g1670 1489 Coils Coil 335 401 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 911 1188 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 946 986 - -
Mtr5g1670 1489 SMART DBC1_2 573 698 IPR025954 -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 846 862 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 704 780 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 1281 1298 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 1070 1171 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 338 439 - -
Mtr5g1670 1489 MobiDBLite consensus disorder prediction 1018 1033 - -
Mtr5g1670 1489 Coils Coil 686 706 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1670 393 709 EF-hand Containing Proteins AT2G03150 56.037 6.94e-115 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1670 K25827 - gmx:100784665 1229.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1670 5 18379119 18388701 Mtr5g1670 5 18379119 18388701 ECH