Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1667 ATGTCCAGCTTCACTCATGCCACTACACTACTCCATGCTCACATCAAAACCAAACACAAAAACACTTCAAACAACATCAACAACAACGTTAACAACTCTTTATCTTCTAAACAAAATGTAACAAATAGAAGAAATTTAGTTTCAACATTTCTAGCAACATCAATGGTTGGAGTAGTACATGTTACAACAACACCACTAGCACTAGCACAGAATTGGGGCACACGTTCTTTTATGAAAGAACATTTTTTTATGCCAGGATTGTCCCCTGAAGATGCAGTTTTAAGGATAAAACAAACAGCTGAAGGGTTACATAATCTTAGGGAAATGTTGGAAACTTTGTCTTGGAGGTATGTTATGTTTTATATAAGATTGAAACAGAATTATCTTGAACAGGATTTGAGAAATGCTATCACTACTTTGCCTGAAAATCGTCGCAAGGAGTATGTTAAAACTGCTAATGAGTTGGTTGATAATTTGACTGAGATGGATCGTTATGTTCGGACACCAAAGGTATATGAATCATACCTATACTACGAGAAGACATTGAAATCAATAGATGAACTTGTGGCTCAGTTAGCTTAG 582 0.3557 MSSFTHATTLLHAHIKTKHKNTSNNINNNVNNSLSSKQNVTNRRNLVSTFLATSMVGVVHVTTTPLALAQNWGTRSFMKEHFFMPGLSPEDAVLRIKQTAEGLHNLREMLETLSWRYVMFYIRLKQNYLEQDLRNAITTLPENRRKEYVKTANELVDNLTEMDRYVRTPKVYESYLYYEKTLKSIDELVAQLA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1667 193 Gene3D - 51 193 IPR023222 -
Mtr5g1667 193 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 193 - -
Mtr5g1667 193 MobiDBLite consensus disorder prediction 16 38 - -
Mtr5g1667 193 SUPERFAMILY Oxygen-evolving enhancer protein 3, 82 192 IPR023222 -
Mtr5g1667 193 MobiDBLite consensus disorder prediction 20 38 - -
Mtr5g1667 193 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 69 193 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Mtr5g1667 193 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 193 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1667 K08901 - gmx:100807480 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1667 5 18326351 18328699 Mtr5g1667 5 18326351 18328699 ECH