Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1640 ATGGAGTTCAAAGGGTCATTTTTAATTAAGCTTCTCTTGCTTCTGCATGTATCAATTCTCTGTGCTTCACAGTCACATGATTTTGATTTCTTCTACTTTGTTCAACAGTGGCCAGGATCATATTGTGACTCACAGAAGAGTAGTTGTTGCTACCCAACAACTGGAAAGCCTGCTGCAGATTTTGGAATTCATGGTCTCTGGCCTAATTATAAGGATGGCACTTACCCTTCTAACTGTGATCCCAGTAACGCTTTTAAGCCATCTCAGATATCTGATCTCACAAGTAATTTACAAAAAAATTGGCCCACACTAGCATGCCCAAGTGGCAATGGAATAACATTTTGGACCCATGAATGGGAGAAACATGGTACTTGCTCTGAATCAGTGCTAAGTCAACATGACTATTTTGAAACAACTCTCAATTTGAGACAAAAAGCCAACCTCCTCCAAGCTCTTACAAGTGCAGGAATACAACCTGATGGAGGATCCTACACTTTGAGCAGCATCAAAGGAGCTATACAAAATGCAATTGGGTATACTCCATACATTGAATGCAATGTTGATTCATCCAAAAACAGCCAACTTTATCAAGTTTACTTGTGTGTGGACACTTCTGGATCAGACTTCATTGACTGCCCTGTGTTCCCAAAAGGCAAAGCATGTGGATCTAAGATTGAGTTCCCATCTTTTTAA 693 0.4012 MEFKGSFLIKLLLLLHVSILCASQSHDFDFFYFVQQWPGSYCDSQKSSCCYPTTGKPAADFGIHGLWPNYKDGTYPSNCDPSNAFKPSQISDLTSNLQKNWPTLACPSGNGITFWTHEWEKHGTCSESVLSQHDYFETTLNLRQKANLLQALTSAGIQPDGGSYTLSSIKGAIQNAIGYTPYIECNVDSSKNSQLYQVYLCVDTSGSDFIDCPVFPKGKACGSKIEFPSF* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1640 230 PANTHER RIBONUCLEASE T2 8 230 IPR001568 GO:0003723|GO:0033897
Mtr5g1640 230 Pfam Ribonuclease T2 family 28 212 IPR001568 GO:0003723|GO:0033897
Mtr5g1640 230 SUPERFAMILY Ribonuclease Rh-like 24 229 IPR036430 GO:0003723|GO:0033897
Mtr5g1640 230 PANTHER BNAA02G26660D PROTEIN 8 230 - -
Mtr5g1640 230 Gene3D - 22 230 IPR036430 GO:0003723|GO:0033897
Mtr5g1640 230 ProSitePatterns Ribonuclease T2 family histidine active site 1. 61 68 IPR018188 GO:0003723|GO:0033897
Mtr5g1640 230 CDD RNase_T2_euk 28 227 IPR033697 -
Mtr5g1640 230 ProSitePatterns Ribonuclease T2 family histidine active site 2. 114 125 IPR033130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1640 Mtr-Chr5 17930388 17932063 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1640 K01166 - gmx:100305644 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1640 5 17930388 17932063 Mtr5g1640 5 17930388 17932063 ECH