Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1624 ATGGCTTTGAATTTTGTTTCTGTGAGGGTTTTCATCAGCAATTATGTGTTCTATTCATTTGGATTGATACTCAGATTCTTCTTGAGGTTTCTTAATTTAGGAGATGCCAAAAAAGATCTCATTAATTTACCATCACAATCACTTGGTGATGGAAATTTTCATGATTTTAAGGTTGATGGTTTTGTAGAAGAGTTGTCTAATTTCCTTTTTTGGAGTGATGATTTTCATCAAAGAGAAACAGAGTGCTCTGTTTTCATGGATTCTGTCCATGAAGAAAAAACAGAGTTCTCTGTTTTGAAGGAAATTCACAATGATTTTCATGAAGATAGTGTGAAAACTGAGATATACATGGAGAGTGTTTTATCAAAGGTGGTTGAGTGTGAAATTCATGAAGAGGGTATTGATAAAGAAAAAGAAGATGAATCTGTTCAACAAGATGGTGGTAAGGAAAATGAAGGGGTAAGTGAAAGGTTTGTTTCAATGGAGAATGATCCAAATGTTGATGAAATGGAAACAAAGAGTTTTGTTTGCTTGAAAAATGGTTATGATCTATGTCATGATCATATGAAGATAGAAGAGAAAGAAGAAGAAATAATAGAGCATGCCATAGTGGAGAATAACTCTAATGTTCATGAAGATGGAAGAATATTTGATGGAATGGAAACAGAGTACTCTGTTTTCATGGAGAATGTCTCTGATGTTATTGAAGATGGTGAGAAAATAGTTGAAAAGGATATAGAGGAATCTGTTTTCAAGGATGATGAGGATAATCTTCATGAGGTTAGCAAGAAAATAGGTGGAATTGAAACAATGATCACAGTTTTCGGTAACGACGATGATAATAAAATAGAAGAAGAAACAGAGCAAGAAACAGAGGACTCTGTTTTTGTGGAGAGTGAAACTATAAAAACAACCACTAGTAGGTATGAATACTTCTCAGAAAAAGATATAAGTTGCTTTGTGGAAGAACCAACAACACTCCGATTCAGTTTTCGAGAATATTACACGAGTCCTGATGTTTCAACCATTTCCCAAAATGCAAACAAAGAGTTTTCAAAGCTTGATTCAGAGAAAGACATTGTAACTGAAGAACTAGAAGAAAAAGAGAAAGAGTCTATTCATTCAACCGATATTCCACTTCTCTTTGAGAGCGAGGCGTTTGGTGGAACTGATTCATCTGATGAAGATTATTTCATTTTCAATGAAAACTCAGTTACATCTGATTCTGAGTCAGAATCATCTAGCTCAAGTGGTTTAATCTGGAGCAACAGCAACAAAATTGATGATTCATTTTCATATGAGTTTCTTGGTAGCAAAAATGGTAGCGAAATTCTAAAGTTGATGATGAGAGATGAAACAATAGAAGATTTGGATGAAAACCAATCTTCATTTGATGATAAAGTTTCAAAATTTGGAGTTGATGAGGTTTATTCTGAGAATGAGTATATAGAAATGGATCCTCATATGAAGGGTTTGAAAACCTTTGAAGAACATGGTTTTGAAGTGAAAGATCAAAAAGAAGGTATGAAGAAAAGTGAAGAGGAATTGAATGGATCAGAATCTGATGAAGATGATTTTGAATGGGAGCATGAAGAAATAGTGGAACAATTGAAGTTAGAATTGAAGAATTCAAGACAAGGAGGACTTGCCACAATCATAGAAGAAGTTGAAGATGAAGAAGAACAAGAACAAGAAGAAAAAGAATCACCAAAAGTGGTTGAAGAATTAAAACCATTGAAAATTGAAGTGAAATTAGAATTCAAGGATCAAATGGATCAAATTGAAAAAGTTTACAAGAGCTATGCAGAGAAAATGAGGAAACTTGATATCTTGAATTATCAAACCATGCATGCATTAGGTCTTCTTCAACTAAAAGACCCTCTTAAATTAATTTCAATACCAAAATCCACCATCTCAAATGGAATAATTTCTCAAAATTTGTGGCCAAGAAAATCAACAAAGATCACATCTGACCCATTTTTAAAACTTGTTCATCAGCTTCATAGAGATTTGGAATTGGTATATGTTGGACAAATTTGCCTTTCATGGGAAATCCTATGTTGGCTACACATGAAAGCTATTGAGTTACAACAATATGACTCACAAAGGTCTCATAGGTATAACCATGTTGCTGGTGAGTTTCAACTTTTTCAAGTATTGATGCAAAGGTTCATAGAGAATGAGCCATTTCAAGGTGGACCAAGGATTCAGAATTATGTAAAGAATCGTTGTGTGATTAGGAACCTGCTTCATGTTCCAGCTATTAAAGATGATATAAAAGGGGGTGAAGAGGATCCAATTGCAAGTGGAAGATTGCAAGATATCATCAAAGAATCAATGCGTGTGTTTTGGGAATTTGTTCGAACAGATAAAGATAATGGGAATGTGAATGTGATTTCTAAGCAAATTGGAAGTGATCTCAAAGACCCTGCAATTGCAAACCTTCTAGTGGACATTCGAATACAACTACAAAAGAAGGATAAAAAGCTGAAGGACATAGTAAGAACTGGAAATTGCATAGTGAAGAAGTTCCAAAAGCACCATGAGGATCAACTTGATCATGAGCAATTGGTTGCTCAAGTTGGATTGCGATTGATTTCAAGGGTGATAAACATGTCACAATTGAGAAAAGAACAAGTACTATGGTGCAGTGAAAAGTTGAACCGTATCAAATTTTTAAGCAGGAAGATTGTCCATGTGGAACCTTCTTTTTTGCTTTTTCCATGCTGA 2730 0.3429 MALNFVSVRVFISNYVFYSFGLILRFFLRFLNLGDAKKDLINLPSQSLGDGNFHDFKVDGFVEELSNFLFWSDDFHQRETECSVFMDSVHEEKTEFSVLKEIHNDFHEDSVKTEIYMESVLSKVVECEIHEEGIDKEKEDESVQQDGGKENEGVSERFVSMENDPNVDEMETKSFVCLKNGYDLCHDHMKIEEKEEEIIEHAIVENNSNVHEDGRIFDGMETEYSVFMENVSDVIEDGEKIVEKDIEESVFKDDEDNLHEVSKKIGGIETMITVFGNDDDNKIEEETEQETEDSVFVESETIKTTTSRYEYFSEKDISCFVEEPTTLRFSFREYYTSPDVSTISQNANKEFSKLDSEKDIVTEELEEKEKESIHSTDIPLLFESEAFGGTDSSDEDYFIFNENSVTSDSESESSSSSGLIWSNSNKIDDSFSYEFLGSKNGSEILKLMMRDETIEDLDENQSSFDDKVSKFGVDEVYSENEYIEMDPHMKGLKTFEEHGFEVKDQKEGMKKSEEELNGSESDEDDFEWEHEEIVEQLKLELKNSRQGGLATIIEEVEDEEEQEQEEKESPKVVEELKPLKIEVKLEFKDQMDQIEKVYKSYAEKMRKLDILNYQTMHALGLLQLKDPLKLISIPKSTISNGIISQNLWPRKSTKITSDPFLKLVHQLHRDLELVYVGQICLSWEILCWLHMKAIELQQYDSQRSHRYNHVAGEFQLFQVLMQRFIENEPFQGGPRIQNYVKNRCVIRNLLHVPAIKDDIKGGEEDPIASGRLQDIIKESMRVFWEFVRTDKDNGNVNVISKQIGSDLKDPAIANLLVDIRIQLQKKDKKLKDIVRTGNCIVKKFQKHHEDQLDHEQLVAQVGLRLISRVINMSQLRKEQVLWCSEKLNRIKFLSRKIVHVEPSFLLFPC* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1624 909 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 1 909 - -
Mtr5g1624 909 MobiDBLite consensus disorder prediction 504 526 - -
Mtr5g1624 909 Coils Coil 351 371 - -
Mtr5g1624 909 Pfam Protein of unknown function (DUF1666) 669 908 IPR012870 -
Mtr5g1624 909 Coils Coil 502 522 - -
Mtr5g1624 909 MobiDBLite consensus disorder prediction 132 153 - -
Mtr5g1624 909 PANTHER OS09G0413600 PROTEIN 1 909 - -
Mtr5g1624 909 Coils Coil 549 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1624 Mtr-Chr5 17756863 17762882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1624 - - mtr:MTR_5g040600 1703.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1624 5 17756863 17762882 Mtr5g1624 5 17756863 17762882 ECH