Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1616 ATGGCTAAACCAAGTTCATCTGGTAGTAGAACTAGAAGCTTTGTGCAGATCTTTATAGTAGTTGGTCTATGTTGTTTCTTCTACATATTAGGTGCATGGCAGAGAACTGGTTTTGGAAAGGGAGATCTTTTACAATTGGAGGTTACTAAGAAAGGTGCTGGTTGTGATATTGTTCCAAATTTAAGCTTTGATTCTCACCATGGTGGAGAAGTTGGCAAAATTGATGAGGTTGATTCAAAACCTAAGGTATTTAAGCCTTGCAAGGCTCGATATATCGATTACACGCCCTGCCATGATCAACGGCGTGCCATGACCTTTTCTAGACAAAATATGATTTATCGAGAGAGGCATTGCCCTCGTGAAGAAGAGAAGTTACATTGTTTGATACCAGCACCGAAAGGGTATGTTACTCCATTTCCATGGCCAAAGAGCCGTGATTATGTTCCATATGCGAACGCACCCTACAAGAGTCTTACAGTTGAGAAGGCTATTCAGAACTGGATCCAATATGAGGGAAATGTGTTCAGATTCCCTGGTGGTGGAACCCAATTCCCTCAAGGGGCTGACAAATATATTGATCAAATTGCTTCTGTGATACCGATCGAGAATGGAACAGTCAGGACAGCACTGGACACTGGTTGCGGGGTTGCCAGTTGGGGTGCATATCTTTGGAGCAGAAATGTTATCGCTATGTCATTTGCACCTAGGGACTCACATGAAGCACAAGTACAGTTTGCACTTGAAAGGGGTGTACCTGCTGTCATTGGTGTCCTAGGAACCATAAAGTTGCCTTATCCATCTGGAGCCTTTGATATGGCGCATTGTTCTCGTTGCTTAATTCCTTGGGGATCAAATGATGGGATTTATTTGATGGAAGTTGACCGAGTTCTAAGACCTGGCGGTTATTGGGTGCTTTCGGGACCTCCAATCCATTGGAAGGCTAATTACAAAGCCTGGCAAAGACCTAAGGAGGATCTTGAGGAAGAACAAAGAAAGATTGAAGATGTTGCTAAGCTCCTTTGCTGGGAGAAGAAGTCCGAGAAGAATGAAATTGCCGTCTGGCAGAAAACTGTTGATTCTGAAACATGTCGACGTAGACAGGAAGATTCTGGTGTGAAGTTCTGTGAATCAACAGATGCTAATGATGTTTGGTATAAGAAAATGGAAGCCTGTGTTACTCCTAATCGTAAAGTCCACGGAGATCTTAAGCCTTTTCCACAGAGATTATATGCAGTTCCTCCTAAAATTGCCAGTGGTTCTGTTCCTGGAGTTTCAGCCGAGACATACCAGGATGATAACAAAAGGTGGAAAAAACATGTAAATGCTTACAAGAAAATAAATAAGCTCCTGGGCTCTGGAAGGTATCGCAATATCATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCTGCTATTCAATCTCCCAAGTTATGGGTCATGAATGTTGTGCCTACTATAGCTGAGAAACATACACTCGGTGCCATTTATCAGCGAGGACTCATAGGCATTTATCATGATTGGTGTGAAGCTTTCTCTACATATCCAAGGACGTACGACCTCATTCATAGCAATGGGCTCTTTAGTCTGTATAAGGACAAATGTAACATAGAAAACATTCTTATGGAGATGGACCGGATTTTACGACCTGAAGGTGCCGTGATATTCCGCGATGAAGTTGATATCTTAATCAAGGTAAAGAAAATTGTTGGAGGAATGCGATGGGATACTAAACTGGTCGACCATGAGGACGGTCCACTTGTTCCGGAAAAGATACTAATTGCTGTCAAGCAGTATTGGGTTGCTGATACAAATACCACATCAACACAATAA 1830 0.4246 MAKPSSSGSRTRSFVQIFIVVGLCCFFYILGAWQRTGFGKGDLLQLEVTKKGAGCDIVPNLSFDSHHGGEVGKIDEVDSKPKVFKPCKARYIDYTPCHDQRRAMTFSRQNMIYRERHCPREEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQIASVIPIENGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSGAFDMAHCSRCLIPWGSNDGIYLMEVDRVLRPGGYWVLSGPPIHWKANYKAWQRPKEDLEEEQRKIEDVAKLLCWEKKSEKNEIAVWQKTVDSETCRRRQEDSGVKFCESTDANDVWYKKMEACVTPNRKVHGDLKPFPQRLYAVPPKIASGSVPGVSAETYQDDNKRWKKHVNAYKKINKLLGSGRYRNIMDMNAGLGSFAAAIQSPKLWVMNVVPTIAEKHTLGAIYQRGLIGIYHDWCEAFSTYPRTYDLIHSNGLFSLYKDKCNIENILMEMDRILRPEGAVIFRDEVDILIKVKKIVGGMRWDTKLVDHEDGPLVPEKILIAVKQYWVADTNTTSTQ* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1616 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 308 IPR029063 -
Mtr5g1616 609 Gene3D Vaccinia Virus protein VP39 161 380 IPR029063 -
Mtr5g1616 609 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 605 IPR004159 GO:0008168
Mtr5g1616 609 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 605 - -
Mtr5g1616 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 558 IPR029063 -
Mtr5g1616 609 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 596 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1616 Mtr-Chr5 17677053 17681827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1616 - - gmx:100778611 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1616 5 17677053 17681827 Mtr5g1616 5 17677053 17681827 ECH