Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1602 ATGAGTAACATGGGGAAGAAGAGTTTTGTGATTGAGGCTTACAAGCACCGTGTTGTCATGGATGCTGATTATGCTGACAAGACTTGGAACATCCTGGAGCATGCAATTCATGACTTATACAACCACAACGTTAGGAATATCAGTTTTGAAGAGCTTTACAGGAATGCTTACAATATGGTTGTTCACAAATTTGGTGAGAAGCTATACTCTGGGCTGGTTGCAACCACAACTTCTCATCTCAAAGAGATAGCTAGATCTCTTGAAGCCACTGAAGGAAGTTCCTTTCTGGAAGAATTAAACAGAAAATGGAATGATCATAATAAGGCATTACGAATGATTAATGACATTCTGATGTACGTGGATAAGACTTATATCCCACAGACCAAGAAGACACATATTTATGAACTTGGCTTGAACCTGTGGACAGAGAATGTTATTTACTCAAAACAGATCAGGACTCGACTGTCGAATATGCTTTTGGAATTAGTATGCAAGGAACGTGCTGGGGAAGATGTTAATATAGAACTGATTAAAAATATTACAAAGATGCTAATGGATTTAGGTTCTTCTGTTTATGAGCAAGAATTCGAGACTTCGTTTCTACAAGTTTCAGCTGAGTTCTACAGGGCTGAATCTCAGAAATTTATCGAGTGCTGTGATTGCGGTGATTATCTCAAGAAAGTTGAGAGGTGCCTGAATGAGGAAACAGATAGAATGTGCCACTACTTGGACCCTAGCACTGAAAAGAAGATTACTAGTGTGATCGAGAAGGAGATGATTGAAAATCACATGCTTAGATTAATCCATATGGAGAACTCGGGGTTAGTAAACATGCTTTGTGGTGATAAATATGAAGATTTGGGAAGAATGTATAACTTGTTTCGTCGTGTTACTAATGGTCTCTCGAAAATACGTGAAGTGACGACTTCACACATCAGAGAGTCCTTGAAACAGCTTCTTACTGATCTAGAAAGGTTGGATGATATTCATGTTGAATTTGTGCAGAGGTTGTTAGATGAGAAAGATAAATATGACAAGATTATAAGCTTGGGATTTAATGAAGACAATTTCTTCCAAAATGCTTTGAATTCCTCGTTCGAATTTTTCATTAACTTGAACCCTTGTTCTCCAGAGTACATTTCACTATTTGTAGACGATAAGCTTAGAAAGGAACTAAAGGGAGTTAGCGAGGATGATGTAGAGATTACTCTTGAAAATGTGACGACGCTATTCCGATACTTGCAAGAAAAAGACATGTTTGAGAAGAATTCCAATCCTAGATTACTAAGATCCTTCTTTCACTTTACTTGTTAA 1314 0.3744 MSNMGKKSFVIEAYKHRVVMDADYADKTWNILEHAIHDLYNHNVRNISFEELYRNAYNMVVHKFGEKLYSGLVATTTSHLKEIARSLEATEGSSFLEELNRKWNDHNKALRMINDILMYVDKTYIPQTKKTHIYELGLNLWTENVIYSKQIRTRLSNMLLELVCKERAGEDVNIELIKNITKMLMDLGSSVYEQEFETSFLQVSAEFYRAESQKFIECCDCGDYLKKVERCLNEETDRMCHYLDPSTEKKITSVIEKEMIENHMLRLIHMENSGLVNMLCGDKYEDLGRMYNLFRRVTNGLSKIREVTTSHIRESLKQLLTDLERLDDIHVEFVQRLLDEKDKYDKIISLGFNEDNFFQNALNSSFEFFINLNPCSPEYISLFVDDKLRKELKGVSEDDVEITLENVTTLFRYLQEKDMFEKNSNPRLLRSFFHFTC* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1602 437 Gene3D Cullin Repeats 265 373 - -
Mtr5g1602 437 Gene3D Cullin Repeats 145 264 - -
Mtr5g1602 437 PANTHER CULLIN-3A-RELATED 4 424 - -
Mtr5g1602 437 Gene3D Cullin Repeats 14 143 - -
Mtr5g1602 437 SUPERFAMILY Cullin repeat-like 22 373 IPR016159 -
Mtr5g1602 437 Gene3D Cullin Repeats 375 433 - -
Mtr5g1602 437 ProSiteProfiles Cullin family profile. 375 437 IPR016158 -
Mtr5g1602 437 PANTHER CULLIN 4 424 IPR045093 -
Mtr5g1602 437 Pfam Cullin family 29 423 IPR001373 GO:0006511|GO:0031625
Mtr5g1602 437 SUPERFAMILY Cullin homology domain 369 428 IPR036317 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1602 Mtr-Chr5 17479958 17483713 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1602 K03869 - gmx:100795098 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1602 5 17479958 17483713 Mtr5g1602 5 17479958 17483713 ECH