Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1594 ATGGGTGCTTCTGGCAACAATTTGCTTCAAGTTCTCGCCAAAAACTTTGATGTTCTTGCTCTGCCTTTGGTAACCCTTGTTTATCCTTTATATGCTTCAATCAAGGCCATAGAAACCAAGAATATTGTTGATGACCAACAATGGCTCACTTATTGGGTTCTTTACTCTTTGATTACACTCTTCGAGCTCACATTTGCCAAAGTTCTTGAAGTGCTTCCGATTTGGCCTTATGCAAAGTTGATACTGAGTTGTTGGTTGGTTCTTCCTCACTTTAATGGAGCAGCACATGTTTATAAATGCTATCTTAGACCATTCTACATGAACCCACAATTACCACAAATGCCGCTAATGCCAGGAACTTCGCAAATGTGGTATGTTCCACGGAAGAACATATTCAGTAAGCAAGATGATGTTCTTAGTGCTGCAGAGAGATACATGCAAGAAAATGGAACAGAAGCATTTGAAAGACTCATCACAAAGACTGACAGAGAAGCTAAAGCAAGGAGGAATGGAAACTACATGATCTTTGATGATGATTATAGATATTAA 549 0.3898 MGASGNNLLQVLAKNFDVLALPLVTLVYPLYASIKAIETKNIVDDQQWLTYWVLYSLITLFELTFAKVLEVLPIWPYAKLILSCWLVLPHFNGAAHVYKCYLRPFYMNPQLPQMPLMPGTSQMWYVPRKNIFSKQDDVLSAAERYMQENGTEAFERLITKTDREAKARRNGNYMIFDDDYRY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1594 182 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Mtr5g1594 182 PANTHER HVA22-LIKE PROTEINS 2 181 IPR004345 -
Mtr5g1594 182 PANTHER HVA22-LIKE PROTEIN 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1594 Mtr-Chr5 17315195 17318917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1594 K17279 - gmx:100306464 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1594 5 17315195 17318917 Mtr5g1594 5 17315195 17318917 ECH
Mtr5g1594 5 17315195 17318917 Mtr4g3919 4 52932835 52934720 PCT