Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1555 ATGGCGTTCAAGATCAAGAACGTACATTCTTTACTCATCTTCATCTTCATCTTCATCTTCATCTTCACTATATCACAAACAACCGCATTAATCACTACAGAAACTTCCACAACAAGCAACACATTAGGGCACTGGATCCAGCTTCAAAATTCCATAGGCATCTCAGCCATGCACATGCAAGTAATGAAAGACAACAAAGTAATCATCTTCGACCGAACCGATTTCGGTCCCTCCAACATCTCCCTCTCCAACAACCGTTGCCGTTACAACCCTCACGACATGGCTCTCAAACTCGACTGCACCGCTCACTCCATCCTCTACGACATCACCACCAACACCCTCCGTCCTTTAACCCTACAAACCGACGCTTGGTGTTCCTCCGGTGCAGTCTCCCCCACCGGAACCCTAATCCAAACCGGTGGCTTCAACGATGGTTACACCAAACTCAGAACGTTTACCCCTTGTCCTCATAACAACACGTGTGATTGGGAAGAGCTTCAACAGAATCTTTCTTCGAGTCGTTGGTATGCTTCGAATCAGATTCTACCAAACGGTAGAATCATTGTCGTTGGTGGTCGTTCATCTTTCTCGTATGAGTTTGTTCCCAAGAGATTAAACGACGCGTCGTTTTATCATCTTCGTTTCTTGCAACTCACGCGAGATTCCAATCCTGGTGAAGAGAATAATCTTTACCCGTTCTTGCATCTTTTACCGACGGGGAATCTTTTCATCTTCGCGAACCGTCGTTCTATTCTGTTTGATTATGAACGAAATAGGGTAATAAGGGAATTTCCTATTATACCTGGTGAAGAGAAGAGAAATTATCCAAGTACAGGTTCTTCTGTTATGTTGCCGTTGAATTTGACGGGGAAAAATGGGACGGAGTTTATTGAGGTTGAGATTATGATCTGCGGCGGCGCGTTTCCCGGCGCGTTTGATTATGCTAGTAAAAAGAAGGTGTTTCTAGAAGCTTCTAGTAGTTGTGGGAGGTTGAAGGTAAGTGACGTGGAACCGGAATGGGTTATGGAGGTTATGCCAGTGCCACGTGTCATGCCGGATATGTTGCTTTTACCGACGGGGAATGTGATTATTTTGAACGGTGCCGCGAATGGTACAGCGGGTTGGGAAAATGCGGCGAACCCGGTTTTGTATCCGGTTTTGTACAAACCCGGTTTGGATAACCCGTTTATGAAATTTGAGTTGTTAGCACCAGCGAGTACACCAAGGATGTATCATTCATCAGCTGTGTTGTTGCCAGATGGCAGGATATTAGTGGGTGGGAGTAACCCGCATCGGCTTTATGACTTCCAGGCCAAGTATCCGACTGAGTTAAGTTTGGATGCGTATTATCCAGATTATCTTCGGCCGGAGTTGGATACATTGCGGCCTGTGATTGTTGCGGTGGAGGTTGTTAATAGTACATTGTCGTATGAGAGTTTGTTTTCGGTGTCGTTTTTGTTGAGGGAGGTGAAGGACGTTAATCGGATTCGTGTTTCAATGGTGGCGCCATCGTTTACTACTCACTCGTTCGCGATGAATCAACGGTTGCTATTTTTAGAAGTTACCGCGTTGGAGGAGGTTGTGAATTCTATGCAAGATCAAAATTTTGGTGAGTTTGGTTTCGGGAGCTCATTAGGACCGGGAAAGATTGCGAATTCGGTTTATAAGGCGACGGTTCGTGGGCCCCCATCTCTTAATGTGGCCCCACCTGGATATTATATGCTTTTTGTTATCCATGTTGGAATTCCTAGTGTTGCTACTTGGGTTCATGTTCACTGA 1779 0.4553 MAFKIKNVHSLLIFIFIFIFIFTISQTTALITTETSTTSNTLGHWIQLQNSIGISAMHMQVMKDNKVIIFDRTDFGPSNISLSNNRCRYNPHDMALKLDCTAHSILYDITTNTLRPLTLQTDAWCSSGAVSPTGTLIQTGGFNDGYTKLRTFTPCPHNNTCDWEELQQNLSSSRWYASNQILPNGRIIVVGGRSSFSYEFVPKRLNDASFYHLRFLQLTRDSNPGEENNLYPFLHLLPTGNLFIFANRRSILFDYERNRVIREFPIIPGEEKRNYPSTGSSVMLPLNLTGKNGTEFIEVEIMICGGAFPGAFDYASKKKVFLEASSSCGRLKVSDVEPEWVMEVMPVPRVMPDMLLLPTGNVIILNGAANGTAGWENAANPVLYPVLYKPGLDNPFMKFELLAPASTPRMYHSSAVLLPDGRILVGGSNPHRLYDFQAKYPTELSLDAYYPDYLRPELDTLRPVIVAVEVVNSTLSYESLFSVSFLLREVKDVNRIRVSMVAPSFTTHSFAMNQRLLFLEVTALEEVVNSMQDQNFGEFGFGSSLGPGKIANSVYKATVRGPPSLNVAPPGYYMLFVIHVGIPSVATWVHVH* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1555 592 CDD E_set_GO_C 462 591 IPR015202 -
Mtr5g1555 592 SUPERFAMILY E set domains 459 591 IPR014756 -
Mtr5g1555 592 Pfam Galactose oxidase-like, Early set domain 462 591 IPR015202 -
Mtr5g1555 592 SUPERFAMILY Galactose oxidase, central domain 105 454 IPR011043 -
Mtr5g1555 592 Pfam Glyoxal oxidase N-terminus 57 306 IPR009880 -
Mtr5g1555 592 Gene3D Immunoglobulins 461 592 IPR013783 -
Mtr5g1555 592 PANTHER F14L17.20 PROTEIN 16 591 - -
Mtr5g1555 592 Gene3D - 39 457 IPR037293 -
Mtr5g1555 592 PANTHER SECRETED PROTEIN-RELATED 16 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1555 Mtr-Chr5 16756972 16759293 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1555 - - mtr:MTR_5g038410 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1555 5 16756972 16759293 Mtr5g1555 5 16756972 16759293 ECH