Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1554 ATGGAACTAGAAGTAGCTCAAATGACAAGATGGGAAGGTTATGTTGACTGGAGGAACAAGCCTGCTCTTAGAGGTCGCCATGGAGGCATGGTTGCAGCCTCCTTTGTTCTAGTTGTTGAGATATTGGAGAATCTAGCATATTTGGCAAATGCAAGCAATTTGGTTTTGTATTTGAAAGAGTATATGCATATGTCTCCTTCTAAATCAGCCAACAATGTCACAAATTTTATGGGAACATCATTTCTACTTGCTCTACTTGGTGGTTTCTTGTCTGATGCATTTCTCACCACTTATCATGTCTACTTGATAAGTGCAGTTATTGAACTCATAGGTCTAATTATACTAACAATACAAGCTCATGTACCTTCACTAAAACCAACAAAATGTAATGAATCCACTCCATGTGAAGAAGTTAATGGTGGAAAAGCAGCAATGTTATTTGCTGGTCTATATCTAGTAGCACTTGGAGTTGGAGGAATAAAAGGATCTTTACCAGTTCATGGTGGTGAACAATTTGATGAAGCTACACCAAATGGAAGGAAGCAAAGATCAACTTTCTTCAACTACTTTGTTTTTTGTCTATCATGTGGTGCCCTTATTGCAGTTACTTTTGTTGTTTGGGTTGAAGATAATAAAGGTTGGGAATGGGGTTTTGCAATATCTACTATCACTATATTTGTGTCTATTCCAGTGTTCTTGGCTGGTTCAACAACTTACAGGAATAAGGTACCTTCAGGAAGTCCACTTACAACCATTTTAAAGGTTCTTATTGCTGCAACACTTAATAGTTGCTGCACAAACAAAAACTCTTGCAGTGCAGTTGTAAACATGTCATCAAGCCCTTCAAATCCAAGCACACAAGCAAAAGAACAAGAACTACATCAAACCCTAAAACCAACCACACCATCTCAAATACCATCAGAATCTCTAAAATTTCTCAACAAAGCAATCACAAACAAACCAATTCATTCATCACTACAATGCACAATCCAACAACTAGAAGATGTCAAACTAGTCTTCAAAATATTCCCGATTTTCGCGTGCACAATCATGCTCAACGCTTGCTTAGCTCAACTCTCCACATTCTCAGTCGAACAAGCCGCGACAATGAACACAACCCTCTTCTCCTCCTTCAAAGTTCCGCCTGCTTCATTACCGGTTTTCCCGGTACTCTTCCTCATGATCCTAGCACCAATATATGATCACATTATAATCCCTTATGCAAGAAAAGTTACAAAATCAGAAGCAGGAATAACTCATCTCCAAAGAATTGGAATTGGGCTAATACTCTCTATAGTTGCAATGGCTATAGCTGCAATTGTTGAAATCAAAAGACAAAAAATAGCATCACACTCAAATGAAAAAAATCCATTACCTATTTCATTTCTTTGGATAGGTTTTCAGTATTTATTTCTTGGTTCAGCTGATCTTTTCACATTGGCTGGATTACTGGAATTTTTCTTCTCAGAAGCACCTTCAAGTATGAGATCATTAGCAACATCACTTTCTTGGGCTTCTTTGGCAATGGGATATTACCTTAGTTCAGTGATTGTTTCTATAGTAAACAGTGTTACTGGTAATGGTAGTCATAAACCATGGTTAAGTGGGTCAAATCTTGATAACTATCATTTGGAGAGATTCTATTGGTTAATGTGTGTGCTTAGTGGGTTGAATTTTCTTCATTATATGTATTGGGCTACTAGGTACAAATATAGAGGGAGAGGAAATATTGATGAATCATGA 1743 0.3735 MELEVAQMTRWEGYVDWRNKPALRGRHGGMVAASFVLVVEILENLAYLANASNLVLYLKEYMHMSPSKSANNVTNFMGTSFLLALLGGFLSDAFLTTYHVYLISAVIELIGLIILTIQAHVPSLKPTKCNESTPCEEVNGGKAAMLFAGLYLVALGVGGIKGSLPVHGGEQFDEATPNGRKQRSTFFNYFVFCLSCGALIAVTFVVWVEDNKGWEWGFAISTITIFVSIPVFLAGSTTYRNKVPSGSPLTTILKVLIAATLNSCCTNKNSCSAVVNMSSSPSNPSTQAKEQELHQTLKPTTPSQIPSESLKFLNKAITNKPIHSSLQCTIQQLEDVKLVFKIFPIFACTIMLNACLAQLSTFSVEQAATMNTTLFSSFKVPPASLPVFPVLFLMILAPIYDHIIIPYARKVTKSEAGITHLQRIGIGLILSIVAMAIAAIVEIKRQKIASHSNEKNPLPISFLWIGFQYLFLGSADLFTLAGLLEFFFSEAPSSMRSLATSLSWASLAMGYYLSSVIVSIVNSVTGNGSHKPWLSGSNLDNYHLERFYWLMCVLSGLNFLHYMYWATRYKYRGRGNIDES* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1554 580 SUPERFAMILY MFS general substrate transporter 47 573 IPR036259 -
Mtr5g1554 580 PANTHER PROTEIN NRT1/ PTR FAMILY 4.6-LIKE 13 574 - -
Mtr5g1554 580 Pfam POT family 101 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr5g1554 580 MobiDBLite consensus disorder prediction 282 304 - -
Mtr5g1554 580 CDD MFS_NPF4 30 568 - -
Mtr5g1554 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 13 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr5g1554 580 Gene3D MFS general substrate transporter like domains 4 576 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1554 Mtr-Chr5 16735573 16742260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1554 1 576 Organic Solute Cotransporters AT1G69850 70.017 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1554 - - lja:Lj2g3v1339020.1 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1554 5 16735573 16742260 Mtr5g1554 5 16735573 16742260 ECH