Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1546 ATGCTAACAGCATGGGTACCCCATTTTCATCCATCACCATGCTCACTCCAACAACAACAACTTGGTACATGCAAAGGCCACACCAATTTACAACTTGGCATATTACTTTCAGGTTTCTTCTGGTTAGCCATAGGCACAGGTGGAATTAATCCATGCAGCATTCCCTTCGCAATCGACCAATTTGATATGACAACAGTTGAAGGTAGACAAGGAACAAGAAGCTTCTACAATTTCTACTATGTTATACAAACTGTGCTTCTTTTAATCAATGTGACACTCGTGGTTAAAATCCAAGACTCTTTTAGTTGGACTCTTGGTTTTGCTTTGCCATGTTTGTTTATGGTCGTTGCTATCGTGTTTTACTTTGCTGGTGCTAAAGTTTATGCATATGTTGAGCCTGAGGGAAGTATATTTTCAAGGATTGCTCAAGTTTTCGTTGCAGCTAAATGCAAGCGTCATGTTCATATTCCTGATAAAGGGGACACAAGTGGTGTTTTCTATGATCCTCCAATTGAGAATATGGAGCCAAAGTTTCCTCTCACAAAGGAGTTCAGGTGTTTAAACAAAGCAGCTATTATGGTGGAGAATGAATTGAATGATGATGGTTCAAACAATAATCCTTGGAGACTTTGTAGCATCCAACAAGTTGAAGAATTAAAATGCATACTTAAAATGATGCCAATATGGGTAACAGGCATCATAACATACATTCCAACAGGTCAATTATCAATCTTTCCAATGTCACAAGCAATGAAAATGGACAAACACCTAACACAAAACTTTGAGATACCACCTGGTTGGATGATTATAGTAACAATGCTAACAATAGCTATAGTCATTCCATTCTATGATAAAGTCATTTCTCCAACACTTACCAAAATGACCAACCAAGACGGAGGGTTAACAAACCTTCAAAGGATTGGACTTGGACATTTTTTCGCAATTTTAACAATGGTAATTGCAGGGTTAGTCGAACAACGAAGAAGGGTTTCGTCGACTTCATTAGGAGAATCATATGAAATTACACAAATGTCAATAATGTGGTTAGTGCCTCAATTTATAACTCTTGGATTCAATCAAGCATTTTCTATTGTTGGACATACTGAGTTTTTCAACAAGGAATCTCCTGATAAAATGAGAAGTATTGGTAATTCTTTGCTTTCACTTCAAACAGCAGTTGCAAGTAATTTAAGCACTTTCATTGTGAACATTATTCATAGTTTTAGTGGAAAACAAGGTGAACCTGATTGGTTGGATAGTGATGTCAATAAGGGAAAATTGGAGTATTTCTATTTCATTGTGGCTGGATTGGGAGTGTTGAATTTTGGTTGGTTCTTGTTTTGTGCTTGTCGTTATAGATACAAGACCTTTGTGAAAATAGAGGACATAAGATAA 1395 0.3677 MLTAWVPHFHPSPCSLQQQQLGTCKGHTNLQLGILLSGFFWLAIGTGGINPCSIPFAIDQFDMTTVEGRQGTRSFYNFYYVIQTVLLLINVTLVVKIQDSFSWTLGFALPCLFMVVAIVFYFAGAKVYAYVEPEGSIFSRIAQVFVAAKCKRHVHIPDKGDTSGVFYDPPIENMEPKFPLTKEFRCLNKAAIMVENELNDDGSNNNPWRLCSIQQVEELKCILKMMPIWVTGIITYIPTGQLSIFPMSQAMKMDKHLTQNFEIPPGWMIIVTMLTIAIVIPFYDKVISPTLTKMTNQDGGLTNLQRIGLGHFFAILTMVIAGLVEQRRRVSSTSLGESYEITQMSIMWLVPQFITLGFNQAFSIVGHTEFFNKESPDKMRSIGNSLLSLQTAVASNLSTFIVNIIHSFSGKQGEPDWLDSDVNKGKLEYFYFIVAGLGVLNFGWFLFCACRYRYKTFVKIEDIR* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1546 464 Gene3D MFS general substrate transporter like domains 1 459 IPR036259 -
Mtr5g1546 464 PANTHER PEPTIDE/NITRATE TRANSPORTER 1 457 - -
Mtr5g1546 464 Pfam POT family 22 414 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr5g1546 464 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 457 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr5g1546 464 SUPERFAMILY MFS general substrate transporter 31 459 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1546 Mtr-Chr5 16606446 16608417 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1546 2 462 Organic Solute Cotransporters AT1G69870 48.052 1.80e-163 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1546 - - gmx:100805397 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1546 5 16606446 16608417 Mtr5g1546 5 16606446 16608417 ECH