Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1522 ATGGAAGGAAGGATCAAATTAAACGGTTGTGGGTACGATGTTACAACTTCATCTCAACTCTGCATTTCAATCATCAACTCCTATTACCAACAGGTTCTTAGTTATGGTAGAGAGAGAAGTGTGATTATGGAAGCAGTGGTTCATGATAATTACTGTGTGTTAGCTAACACTTTAGCAGCTCATTTTATTAACTCTTCTGATTCTTCAAGAGCTGCCTCTTTACTTCATACTGCTAAGTCTCACCTTGAACATGCAACCTTGTACGAGAAACTAGTTTTTGATGTCATCAGTTATTTGATGTCCGAAGATAGAGATGACGATGTAGCTGTCGAGTTGCATTCTAAGCTTCTAAAGGAGTTCCCAAGAGATTTGGTTTCTCTAAAGAGAGCACAAATCTTGTGTTTCAACATGGGACGGCCCGATCTTTCTTTATCCCTTGTTAATCAGGTTCTACCTCAAAATGAAGGAGAAAATTTCATATATGGCATGCTTGCTTTTCCTTTGTTGGAGCTTGGACAAATGAAAGAAGCCGAGGAAGCTGCCAAAAGAGGATTTGAAATCAACAACCAAGATGGCTGGTCACAGCATGCTACATGTCATGTTCTTCAGTATGAGTGCCGTTTTAGAGAAGCCGTTGAGTTCATGGAAGAATGTTCGCCGTCATGGAACTCTTTTTTATCGTTTATGTTGACTCATAATTGGTGGCATGTAGCACTTTGTTACTTAGAAGGGAATGCTCCAATGCAACGTGTGCTCGAGGTATATGACAATTATATATGGAAGGAGCTAGACAAAACCGATGCTACGGTTGCTGAGGTATACTTAAATGCTGTGGCTCTGCTTCTGCGGTTGTGCGTGCGTGATGAATTGGAGTTTTTTGGTGATCGGCTCAAGATGCTAGCAGATCGCCTTGCTGATCAAGCAAACTGGTATTTAGAGTGGCACCTTGATATATTGACAGTGTGGGCTTTGGCAAAGACTGGACAAATTTCTAAAGCAGAAGAACTTCTTAAAGGCTTAAAAGAAAGGATTTCGAGGATGACTAAAAAGAAACAACAAATAATGCAGAAAGGAATGGTGCTTGCAGAAGCACTTTATGCATATGGAAGAGGTAACAACAAACATGGAGTGGAATTACTTGGTCCAGATTTTGATGCCAATGATTACAAGATAATTGGAGCATCTGATGAACAAGTTGATGTATTCAATGAAGTTTGGTACATCATGTTGTTGAACAATGGCGACGCAATAAAGGCAATTGAAGTAATTGAGAAGCAAATCAAGAAGAGAGACGGCACTGCTTTCTTATGGCGTTTGCTGGAGAGAGGATACAAACTAGCAAATAGACCAGAAGCTGCAATTGCAAATGAAAAAGCTAAGGTTTTCGAGAGTGCTTATTTTAATTAA 1407 0.398 MEGRIKLNGCGYDVTTSSQLCISIINSYYQQVLSYGRERSVIMEAVVHDNYCVLANTLAAHFINSSDSSRAASLLHTAKSHLEHATLYEKLVFDVISYLMSEDRDDDVAVELHSKLLKEFPRDLVSLKRAQILCFNMGRPDLSLSLVNQVLPQNEGENFIYGMLAFPLLELGQMKEAEEAAKRGFEINNQDGWSQHATCHVLQYECRFREAVEFMEECSPSWNSFLSFMLTHNWWHVALCYLEGNAPMQRVLEVYDNYIWKELDKTDATVAEVYLNAVALLLRLCVRDELEFFGDRLKMLADRLADQANWYLEWHLDILTVWALAKTGQISKAEELLKGLKERISRMTKKKQQIMQKGMVLAEALYAYGRGNNKHGVELLGPDFDANDYKIIGASDEQVDVFNEVWYIMLLNNGDAIKAIEVIEKQIKKRDGTAFLWRLLERGYKLANRPEAAIANEKAKVFESAYFN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1522 468 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 10 466 IPR033891 -
Mtr5g1522 468 SUPERFAMILY TPR-like 104 455 IPR011990 GO:0005515
Mtr5g1522 468 Coils Coil 330 357 - -
Mtr5g1522 468 CDD StaR_like 48 407 IPR033891 -
Mtr5g1522 468 Gene3D Tetratricopeptide repeat domain 26 456 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1522 Mtr-Chr5 16287515 16293636 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1522 - - lja:Lj2g3v1349460.1 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1522 5 16287515 16293636 Mtr5g1522 5 16287515 16293636 ECH