Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1516 ATGGGAGCATGTGTGTCAACTCAACAAGGTTGTGTTGGAGGAAGGTTTAAGAAGAAAAACAGAAAAAGGAAAAGAATCATTGGATTCAGAAGAAGAGTTTCTTCTCAGTTTTCATCATTGGATAATAACAAAGTTGATTTGCCAAGTTTGCCTCAACATTCTTTTACCAACCCAACTTTCCAAGGAAGCATTGAAGAGGCATGGTTTGATTCAGTTACTGTATTTGATTCTGACTGTGATGATGATTACCAGAGTGTTCCTGATGATGTTGTATCTCTGAATGGAATTGAAGGCGGATCTGTATCAAGTTTTCCACATTCAAGAGATGCCAATCAATCGCAGAAACCGAATATCTCTGAGGCTGCTAGAAGTTCAGATGTTCAGCATGTCGGTGTAGATGGAAATATGATTGAAGTAACCGAACCTGTGTTCCTTGACGATATTTCCTCGGTTGATGCGAATTCAAATAAGGATGAAGGAATTTTGGATAATTGTGGCATTATTCCAAACAATTGTTTGCCATGTCTTGCATCTACCATTCCTTCTCTTGAAAAAAGAAGATCATGTTCAAGTCCTCCTAATTCAAAGAAGAAGGCTCCTCCGAAACTTTCTAGTCGATTTTCTTCAAAGACACTACAAAGACCAATTGCAGGTTCTCAAGTACCCTTTTGTCCTATTGACAAGAAAATGCTTGATTGTTGGTCACACATTGAGCCAGGAACTTTCAAAGTCCGAAGCGTAAATTATTTCAAGGATAGGAAGAAGGAATTTGCTCCAAACTATTCTGCATATTATCCATTTGGAGTTGATGTTTTCTTATCTCCGCGAAAAGTGGACCATATCGCTCGGTTTGTTGAACTTCCTAATGTTAGTTCCACTGCCAAATTTCCACCAATTCTTGTTGTAAATGTTCAGATTCCGCTTTACCCTACAACGCTTTTTCAAGGTGAAATTGATGGAGAAGGAGCGAGTTTTGTCTTGTATTTTAAGCTTTCGGAAAGTTACGCGAAGGAACTTCCTCAACATTTTCAAGAAAACATTAGAAAGTTGATGGATGATGAAGTTGAAAAGGTAAAGGGCTTTCCGGTTGATACAATTGCTCCGTTTCGAGAACGATTGAAAATACTAGGCCGTGTTGGCAATATAGAAGACCTTCATTTGAGTGCAGCTGAAAGGAAGCTTATGCAGGCTTACAATGAGAAACCTGTTCTTTCGCGTCCCCAACACGAGTTTTACTCGGGAGAAAATTACTTTGAGATTGATATAGATATGCATAGATTTGGTTATATCTCAAGAAAAGGGTTTGAAGCATTCATGGACAGATTAAAGATCTGCACTCTAGATATTGGTCTTACAATTCAGGGGAACAAAGTTGAGGAGCTGCCAGAGCAAGTATTATGTTGTATTAGGTTAAATGGCATTGACCACTTGAATTACCACCAACTAGGGCTAACTCAAGATCCCCTCTAA 1470 0.3878 MGACVSTQQGCVGGRFKKKNRKRKRIIGFRRRVSSQFSSLDNNKVDLPSLPQHSFTNPTFQGSIEEAWFDSVTVFDSDCDDDYQSVPDDVVSLNGIEGGSVSSFPHSRDANQSQKPNISEAARSSDVQHVGVDGNMIEVTEPVFLDDISSVDANSNKDEGILDNCGIIPNNCLPCLASTIPSLEKRRSCSSPPNSKKKAPPKLSSRFSSKTLQRPIAGSQVPFCPIDKKMLDCWSHIEPGTFKVRSVNYFKDRKKEFAPNYSAYYPFGVDVFLSPRKVDHIARFVELPNVSSTAKFPPILVVNVQIPLYPTTLFQGEIDGEGASFVLYFKLSESYAKELPQHFQENIRKLMDDEVEKVKGFPVDTIAPFRERLKILGRVGNIEDLHLSAAERKLMQAYNEKPVLSRPQHEFYSGENYFEIDIDMHRFGYISRKGFEAFMDRLKICTLDIGLTIQGNKVEELPEQVLCCIRLNGIDHLNYHQLGLTQDPL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1516 489 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 234 475 IPR009769 -
Mtr5g1516 489 MobiDBLite consensus disorder prediction 101 126 - -
Mtr5g1516 489 PANTHER CW14 PROTEIN 1 114 - -
Mtr5g1516 489 PANTHER CW14 PROTEIN 130 487 - -
Mtr5g1516 489 MobiDBLite consensus disorder prediction 185 212 - -
Mtr5g1516 489 MobiDBLite consensus disorder prediction 101 124 - -
Mtr5g1516 489 PANTHER - 1 114 - -
Mtr5g1516 489 PANTHER - 130 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1516 Mtr-Chr5 16207544 16212057 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1516 - - aprc:113869019 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1516 5 16207544 16212057 Mtr5g1516 5 16207544 16212057 ECH
Mtr5g1699 5 18791685 18797028 Mtr5g1516 5 16207544 16212057 PCT