Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1504 ATGTCCTCACGTCGCCACTCCCTCAGCGGCCCACCGCAACTCACCGCCACCACTCCTCCCAACCTCCGGCAACGCGTCATCACTTGCCTCAACAAACTCTCCGACCGCGACACACTCGCCGGCGCCACCGTCGAACTCGAATCCATCGCTAAAACCCTAAACCACGACACTTTCTCCTCTTTTCTCTCATGCATTCACAACACCGATTCCTCCACGAAATCACCGGTTCGTAAACAATGCGTTAACCTCTTAACTCTTCTTTCGAAGTTTCACGGTGACGCTCTTTCGCCATTTTTGTCGAAAATGATTGCTACTGTTCTTCGTCGCATTCATGATCCGGATACTGTTGTTAGATCTGCTTGTGTTGAAGCTGTGGCGGAAATGTCGTTAAGGATTACTCGACCGGCGTTTGCGGTTGCGTTTTTGAGGCCGTTTATGGAGGCGTTAACGGTAGAGCAAGATGTAAACGCGCAGATCGGAGGTGCGTTGTGTCTTGCGGCGGCGGTTGAGGCGGCGCCGGAGGTGGATGTGGAGTTGCTGCGTCGGAATACGCTTCCGAGGTTGGGGAAGGTTTTGAAGACGGAGTCGTGTAAGGCGAAGGCGCCGGTATTGGTGCTGATCGGAAGTGTGGTTTCCGTTGGTGGCGCGGCGAGTAGAGGAACGATGAATTGGTTGGTTCCGTATCTTGTTGAGTTGCTTGGAAGTGAGGATTGGACTGTGAGGAAAGCCTCGGCGGAGGCGTTGGGGAAGGTAGCGTCGGTAGAGAGAGATTTTGCGACGCAGCATAAGGTTCTGTGTTTGGAGTCGTTGCAAAATCGAAGGTTTGATAAGGTGAAAGTTGTTAGAGAGACTATGAATCGTGTATTGGATATGTGGAAGGAAGTAAAGGATGTGTCTGAAAATGTTTCTTCTCCTGTTAAGTCTGCATGTGCTTCAGTTGGTACAGATGACGGTAATGGTCGATGTGGGACCAGAAGTTCACCTGTTGGCTCTAAATTTTCTCAACCAAAGAAAATGGTCCCTTCAAACAGGTCCCCTCCATCTACTGGTTCAATTTTATCCTCTGGCAAAAGAGAGAGTCCTCTAAACAATAATGACAAGAATTCAAGAATGGGGATGTTGCATCAGCAGGCTCATAAGAAATTATCTGATGAAAAACTTGAATCTCCCATATCAAAGTCCTCTCTTTCAAATATGACTAAGGAAGATGATATTAAAAGGTGTGACTTTGAAGCTTCTAAGCCAGCCCCAAATCAGAATGCGACAAATTTGAGGGCTGATGTAAAGCGTGTTTTCGGTAACAAGATGTCTGACGAGAAAATCCGGAAGTTTGGTGGTTCAAAAGCTCGTGTAGTTCCATGTTATGATGATGACGACCTCGAGACAGATGTTACTGTCAACAATGATAATGAAATTTGTGAGAGCCCGCAAGATGTTGAGGATTTGTCTCTGATTCGGGACCAACTTGTTCAAATTGAAAACCAACAATCAAATCTATTAGACCTGCTCCAGAGATTTATTGGCACATCCCAAAATGGGATGAATTTGCTTGAGACACGCGTATATGGTCTAGAGATGGCCTTGGATGAAATATCTTATGATTTGGCAGTATCCAGTGGTCGGATTCCCAATACTGATGCCATAGACGACATGTGTTGCAAGCTACCTGGTACTGACTTTTTGAGTTCTAAATTCTGGAAGAAGACAGACAGTCGGTATACAACATCAAGGCTCTCTTTTGGAAGTTCAGCATCAACTAATCTTGTGCATAATGCAACTGATAGAAATGGAAGCAAAGAAATATTTACTACAAATAGCAAAAGATTTCAGCATCGTAGGGATGAGGGTGGAAGTTTTATGAACCCACTGGCAGAAATTCAAAGTAATTTGAAGGGGAGTTCAGGGCAACATTCGTATAAAATCTCTAAAAACTTTGCTCAAGATGCTGGGAGTGCACAAAGTAACAGTTCCAGCAGATTTGATGGCATTTCATCAACTATTGAAGTACTGAGGAACCAGAATATCAGATCATCCGCGTAG 2040 0.4544 MSSRRHSLSGPPQLTATTPPNLRQRVITCLNKLSDRDTLAGATVELESIAKTLNHDTFSSFLSCIHNTDSSTKSPVRKQCVNLLTLLSKFHGDALSPFLSKMIATVLRRIHDPDTVVRSACVEAVAEMSLRITRPAFAVAFLRPFMEALTVEQDVNAQIGGALCLAAAVEAAPEVDVELLRRNTLPRLGKVLKTESCKAKAPVLVLIGSVVSVGGAASRGTMNWLVPYLVELLGSEDWTVRKASAEALGKVASVERDFATQHKVLCLESLQNRRFDKVKVVRETMNRVLDMWKEVKDVSENVSSPVKSACASVGTDDGNGRCGTRSSPVGSKFSQPKKMVPSNRSPPSTGSILSSGKRESPLNNNDKNSRMGMLHQQAHKKLSDEKLESPISKSSLSNMTKEDDIKRCDFEASKPAPNQNATNLRADVKRVFGNKMSDEKIRKFGGSKARVVPCYDDDDLETDVTVNNDNEICESPQDVEDLSLIRDQLVQIENQQSNLLDLLQRFIGTSQNGMNLLETRVYGLEMALDEISYDLAVSSGRIPNTDAIDDMCCKLPGTDFLSSKFWKKTDSRYTTSRLSFGSSASTNLVHNATDRNGSKEIFTTNSKRFQHRRDEGGSFMNPLAEIQSNLKGSSGQHSYKISKNFAQDAGSAQSNSSSRFDGISSTIEVLRNQNIRSSA* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1504 679 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 3 666 - -
Mtr5g1504 679 MobiDBLite consensus disorder prediction 319 372 - -
Mtr5g1504 679 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 666 IPR033337 GO:0005874|GO:0008017
Mtr5g1504 679 MobiDBLite consensus disorder prediction 1 21 - -
Mtr5g1504 679 MobiDBLite consensus disorder prediction 308 400 - -
Mtr5g1504 679 SUPERFAMILY ARM repeat 17 289 IPR016024 -
Mtr5g1504 679 Gene3D - 12 397 IPR011989 -
Mtr5g1504 679 Pfam HEAT repeat 225 254 IPR000357 GO:0005515
Mtr5g1504 679 ProSiteProfiles HEAT repeat profile. 225 263 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1504 Mtr-Chr5 16039307 16043729 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1504 - - mtr:MTR_5g036950 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1504 5 16039307 16043729 Mtr5g1504 5 16039307 16043729 ECH