Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1495 ATGGCACTATCACGATTATCATCATCATCAACTTCAACCATCAAATCAAATCTCATCAAACCAATCTCCACCATCTTCACTCTCAACCGTTCGATCTCCTCCGACACCACACTCTCAATCGAAACCTCCATCCCTTTCACCGCCCACAACTGCACTCCACCTTCCACCACCGTCACCACAACCCCCAATGAACTCCTCAACTTCTTCCATACCATGTCTCTAATGCGTCGTATGGAAATCGCTGCGGATTCTCTTTACAAATCCAAACTCATCCGTGGTTTCTGCCATCTTTACGACGGCCAGGAAGCCGTCGCAGTCGGCATGGAAGCATCAACCACCAAAAAAGACTGTATTATCACTGCGTACCGTGATCACTGTACTTTCCTCGGCCGCGGTGGAACATTGTTGGAAGTCTATTCTGAACTTATGGGGAGAGTTGATGGGTGCTCTAAAGGGAAAGGTGGGTCCATGCATTTTTATAAGAAGGATTCTGGGTTTTTTGGTGGTCATGGGATTGTGGGAGCTCAGGTTCCACTTGGTTGTGGTTTGGCTTTTGGGCAAAAGTATTTGAAGAATGAGAGTGTTACTTTTGCACTGTATGGTGATGGTGCTGCTAATCAAGGGCAGCTTTTTGAAGCGCTTAATATTGCTGCTCTTTGGGATCTTCCTGCTATTTTGGTTTGTGAGAATAATCATTATGGAATGGGAACTGCTGAGTGGAGAGCTGCTAAGAGTCCTGCTTATTATAAGAGGGGAGATTATGTGCCTGGATTGAAGGTAGATGGCATGGATGTTCTTGCTGTGAAACAAGCTGTTAAATTTGCAAAGGAGCATGCTTTGCAGAATGGGCCCATTATTCTTGAAATGGACACTTACAGATACCATGGTCACTCTATGTCTGATCCTGGCAGCACATACCGAACACGTGATGAAATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAAAAAGCTGTTATTGTCTCATGACATTGCTACCGAAAAGGAGCTAAAGGACACTGAAAAAGAAGTCAGAAAAGAAGTTGATGAAGCCATTGCTAAAGCAAAGGAGAGTCCAGTGCCAAAGCCATCTGATCTATTTACCAATGTATATGTTAAAGGATATGGGGTTGAGGCATTTGGTGCTGATAGGAAAGAAGTGAGAGCTACTTTGCCATAA 1188 0.4444 MALSRLSSSSTSTIKSNLIKPISTIFTLNRSISSDTTLSIETSIPFTAHNCTPPSTTVTTTPNELLNFFHTMSLMRRMEIAADSLYKSKLIRGFCHLYDGQEAVAVGMEASTTKKDCIITAYRDHCTFLGRGGTLLEVYSELMGRVDGCSKGKGGSMHFYKKDSGFFGGHGIVGAQVPLGCGLAFGQKYLKNESVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQAVKFAKEHALQNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVKKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKESPVPKPSDLFTNVYVKGYGVEAFGADRKEVRATLP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1495 395 CDD TPP_E1_PDC_ADC_BCADC 68 358 - -
Mtr5g1495 395 Pfam Dehydrogenase E1 component 71 366 IPR001017 GO:0016624
Mtr5g1495 395 Gene3D - 27 389 - -
Mtr5g1495 395 Coils Coil 337 357 - -
Mtr5g1495 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 16 395 - -
Mtr5g1495 395 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 63 375 IPR017597 GO:0004739|GO:0006086|GO:0043231
Mtr5g1495 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 16 395 - -
Mtr5g1495 395 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 55 376 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1495 Mtr-Chr5 15893004 15899592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1495 1 395 Acyl Lipid Metabolism Gene Families AT1G24180 76.768 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1495 K00161 - cit:102613187 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1495 5 15893004 15899592 Mtr5g1495 5 15893004 15899592 ECH